Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00220 and RBAM_001410

See Amino acid alignment / Visit BSNT_00220 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence dna-align/BSNT_00220___rplC.1.9828.seq
#    -bsequence dna-align/RBAM_001410___rplC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00220___rplC-RBAM_001410___rplC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00220___rplC-RBAM_001410___rplC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00220___rplC
# 2: RBAM_001410___rplC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity:     598/630 (94.9%)
# Similarity:   598/630 (94.9%)
# Gaps:           0/630 ( 0.0%)
# Score: 2862.0
# 
#
#=======================================

BSNT_00220___      1 ATGACCAAAGGAATCTTAGGAAGAAAAATTGGTATGACGCAAGTATTCGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001410__      1 ATGACCAAAGGAATCTTAGGAAGAAAAATTGGTATGACGCAAGTATTCGC     50

BSNT_00220___     51 TGAGAATGGTGATCTTATTCCGGTAACTGTTATCGAGGCTGCTCCAAACG    100
                     .|||||.|||||||||||.||||||||||||||.||.||.||||||||||
RBAM_001410__     51 AGAGAACGGTGATCTTATCCCGGTAACTGTTATTGAAGCAGCTCCAAACG    100

BSNT_00220___    101 TTGTTCTTCAAAAGAAAACAGCTGAAAACGACGGTTACGAAGCAATCCAG    150
                     |||||||||||||||||||||||||||||||.||.||.|||||.||||||
RBAM_001410__    101 TTGTTCTTCAAAAGAAAACAGCTGAAAACGATGGCTATGAAGCGATCCAG    150

BSNT_00220___    151 CTTGGTTTTGACGACAAGCGTGAAAAGCTTTCTAACAAACCTGAAAAAGG    200
                     ||||||||||||||.|||||||||||||||||.||||||||.||||||||
RBAM_001410__    151 CTTGGTTTTGACGATAAGCGTGAAAAGCTTTCAAACAAACCGGAAAAAGG    200

BSNT_00220___    201 GCACGTTGCAAAAGCGGAAACTGCTCCTAAGCGCTTCGTTAAAGAATTAC    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001410__    201 ACACGTTGCAAAAGCGGAAACTGCTCCTAAGCGCTTCGTTAAAGAATTAC    250

BSNT_00220___    251 GCGGAGTGGAAATGGATGCGTATGAAGTTGGTCAGGAAGTCAAGGTTGAA    300
                     ||||.|||||.|||||||||||||||.|||||||||||||||||||||||
RBAM_001410__    251 GCGGCGTGGATATGGATGCGTATGAAATTGGTCAGGAAGTCAAGGTTGAA    300

BSNT_00220___    301 ATTTTCTCTGCTGGAGAAATCGTAGATGTAACAGGAGTATCTAAAGGTAA    350
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_001410__    301 ATTTTCTCTGCAGGAGAAATCGTAGATGTAACAGGAGTATCTAAAGGTAA    350

BSNT_00220___    351 AGGTTTCCAAGGTGCGATCAAGCGCCACGGACAATCTCGCGGACCTATGT    400
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_001410__    351 AGGTTTCCAAGGTGCAATCAAGCGCCACGGACAATCTCGCGGACCTATGT    400

BSNT_00220___    401 CTCACGGTTCACGCTACCACCGTCGTCCTGGTTCAATGGGACCTGTAGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001410__    401 CTCACGGTTCACGCTACCACCGTCGTCCTGGTTCAATGGGACCTGTAGAT    450

BSNT_00220___    451 CCTAACCGTGTATTCAAAGGTAAATTATTACCTGGACGTATGGGCGGAGA    500
                     ||||||||||||||||||||||||.|||||||||||||.|||||||||||
RBAM_001410__    451 CCTAACCGTGTATTCAAAGGTAAACTATTACCTGGACGCATGGGCGGAGA    500

BSNT_00220___    501 GCAAATCACTGTTCAAAATCTTGAAATCGTTAAAGTTGATGCAGAACGCA    550
                     .|||||||||||.|||||.|||||||||||.|||||.|||||.||.||||
RBAM_001410__    501 TCAAATCACTGTCCAAAACCTTGAAATCGTAAAAGTAGATGCTGAGCGCA    550

BSNT_00220___    551 ATCTTCTTTTGATCAAAGGTAACGTACCTGGTGCGAAGAAATCTTTAATC    600
                     |||||||||||||.||||||||||||||||||||||..|||.||||||||
RBAM_001410__    551 ATCTTCTTTTGATTAAAGGTAACGTACCTGGTGCGAGAAAAACTTTAATC    600

BSNT_00220___    601 ACTGTTAAAAGTGCTGTTAAATCTAAATAA    630
                     ||||||||||||||||||||||||||||||
RBAM_001410__    601 ACTGTTAAAAGTGCTGTTAAATCTAAATAA    630


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