Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00221 and RBAM_001420

See Amino acid alignment / Visit BSNT_00221 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence dna-align/BSNT_00221___rplD.1.9828.seq
#    -bsequence dna-align/RBAM_001420___rplD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00221___rplD-RBAM_001420___rplD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00221___rplD-RBAM_001420___rplD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00221___rplD
# 2: RBAM_001420___rplD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 624
# Identity:     594/624 (95.2%)
# Similarity:   594/624 (95.2%)
# Gaps:           0/624 ( 0.0%)
# Score: 2850.0
# 
#
#=======================================

BSNT_00221___      1 ATGCCAAAAGTAGCATTATACAACCAAAACGGTTCTACTGCTGGTGACAT     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_001420__      1 ATGCCAAAAGTAGCATTATACAACCAAAACGGTTCTACTGCTGGTGATAT     50

BSNT_00221___     51 CGAATTAAACGCTTCTGTATTTGGTATCGAACCAAATGAGAGTGTTGTAT    100
                     ||||||||||||.|||||||||||.||.||.|||||||||||.||.||||
RBAM_001420__     51 CGAATTAAACGCGTCTGTATTTGGAATTGAGCCAAATGAGAGCGTAGTAT    100

BSNT_00221___    101 TCGACGCTATTCTTATGCAAAGAGCTTCCTTACGTCAAGGAACTCACAAA    150
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_001420__    101 TCGACGCTATTCTTATGCAAAGAGCTTCCTTACGTCAAGGATCTCACAAA    150

BSNT_00221___    151 GTAAAAAATCGTTCTGAAGTACGCGGCGGAGGTCGTAAACCATGGCGTCA    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_001420__    151 GTAAAAAATCGTTCTGAAGTACGCGGCGGAGGTCGCAAACCATGGCGTCA    200

BSNT_00221___    201 AAAAGGTACTGGACGTGCCCGTCAAGGTTCAATCCGTTCACCGCAATGGC    250
                     |||||||||.||.|||||||||||||||||||||||||||||||||||||
RBAM_001420__    201 AAAAGGTACAGGTCGTGCCCGTCAAGGTTCAATCCGTTCACCGCAATGGC    250

BSNT_00221___    251 GCGGAGGTGGTGTCGTATTCGGCCCAACACCACGCAGCTATTCTTATAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_001420__    251 GCGGAGGTGGTGTCGTATTCGGCCCAACACCACGCAGCTATTCTTACAAA    300

BSNT_00221___    301 TTACCTAAAAAAGTTCGCCGCTTGGCAATCAAATCAGTATTGTCTTCTAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001420__    301 TTACCTAAAAAAGTTCGCCGCTTGGCAATCAAATCAGTATTGTCTTCTAA    350

BSNT_00221___    351 AGTGATCGACAACAATATCATCGTTCTTGAAGATCTTACTCTTGATACGG    400
                     |||||.|||||||||.||.||.||||||||||||||||||||||||||||
RBAM_001420__    351 AGTGAACGACAACAACATTATTGTTCTTGAAGATCTTACTCTTGATACGG    400

BSNT_00221___    401 CTAAAACAAAAGAAATGGCAGCTATCCTTAAAGGGTTATCTGTTGAGAAA    450
                     .|||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_001420__    401 TTAAAACAAAAGAAATGGCAGCTATCCTTAAAGGATTATCTGTTGAGAAA    450

BSNT_00221___    451 AAAGCTTTAATCGTAACTGCGGATGCAAACGAAGCAGTAGCATTATCTGC    500
                     |||||||||||||||||||||||||||||||||||||||.|..|.|||||
RBAM_001420__    451 AAAGCTTTAATCGTAACTGCGGATGCAAACGAAGCAGTATCTCTTTCTGC    500

BSNT_00221___    501 TCGTAACATTCCTGGAGTTACTGTTGTTGAAGCTAATGGAATCAACGTTT    550
                     .||.|||||.|||||||||||.||||||.|||||||.|||||||||||.|
RBAM_001420__    501 ACGCAACATCCCTGGAGTTACAGTTGTTCAAGCTAACGGAATCAACGTGT    550

BSNT_00221___    551 TAGACGTTGTCAACCACGAGAAGCTTCTGATTACAAAAGCAGCGGTTGAA    600
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_001420__    551 TAGACGTTGTCAACCACGAGAAGCTTCTGATTACAAAAGCTGCGGTTGAA    600

BSNT_00221___    601 AAAGTAGAGGAGGTGCTTGCATAA    624
                     ||||||||||||||||||||||||
RBAM_001420__    601 AAAGTAGAGGAGGTGCTTGCATAA    624


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