Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00222 and RBAM_001430

See Amino acid alignment / Visit BSNT_00222 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence dna-align/BSNT_00222___rplW.1.9828.seq
#    -bsequence dna-align/RBAM_001430___rplW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00222___rplW-RBAM_001430___rplW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00222___rplW-RBAM_001430___rplW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00222___rplW
# 2: RBAM_001430___rplW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     280/288 (97.2%)
# Similarity:   280/288 (97.2%)
# Gaps:           0/288 ( 0.0%)
# Score: 1368.0
# 
#
#=======================================

BSNT_00222___      1 ATGAAAGATCCTCGTGATGTTCTAAAGCGCCCCGTCATTACTGAACGTTC     50
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_001430__      1 ATGAAAGATCCTCGTGATGTTCTTAAGCGCCCCGTCATTACTGAACGTTC     50

BSNT_00222___     51 TGCTGATTTAATGACTGAAAAGAAATATACTTTTGAAGTTGATGTAAGAG    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_001430__     51 TGCTGATTTAATGACTGAAAAAAAATATACTTTTGAAGTTGATGTAAGAG    100

BSNT_00222___    101 CTAACAAAACAGAAGTGAAAGACGCGGTTGAAAGCATCTTTGGAGTGAAA    150
                     ||||||||||||||||||||||.||.||||||||.|||||||||||||||
RBAM_001430__    101 CTAACAAAACAGAAGTGAAAGATGCAGTTGAAAGTATCTTTGGAGTGAAA    150

BSNT_00222___    151 GTTGACAAAGTCAACATCATGAACTACAAAGGTAAATCAAAACGTGTTGG    200
                     ||||||||||||||||||||||||||||||||.||||||||||||||.||
RBAM_001430__    151 GTTGACAAAGTCAACATCATGAACTACAAAGGGAAATCAAAACGTGTCGG    200

BSNT_00222___    201 ACGCTACACTGGTATGACTAGCCGTCGCAGAAAAGCGATCGTAAAACTTA    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001430__    201 CCGCTACACTGGTATGACTAGCCGTCGCAGAAAAGCGATCGTAAAACTTA    250

BSNT_00222___    251 CTGCAGACAGCAAAGAAATCGAAATTTTTGAAGCTTAA    288
                     ||||||||||||||||||||||||||||||||||||||
RBAM_001430__    251 CTGCAGACAGCAAAGAAATCGAAATTTTTGAAGCTTAA    288


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