Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00233 and RBAM_001540

See Amino acid alignment / Visit BSNT_00233 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_00233___rpsN.1.9828.seq
#    -bsequence dna-align/RBAM_001540___rpsN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00233___rpsN-RBAM_001540___rpsN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00233___rpsN-RBAM_001540___rpsN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00233___rpsN
# 2: RBAM_001540___rpsN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity:     182/186 (97.8%)
# Similarity:   182/186 (97.8%)
# Gaps:           0/186 ( 0.0%)
# Score: 894.0
# 
#
#=======================================

BSNT_00233___      1 GTGGCTAAAAAGTCTATGATTGCGAAACAACAACGTACACCAAAGTTTAA     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_001540__      1 GTGGCTAAAAAGTCAATGATTGCGAAACAACAACGTACACCAAAGTTTAA     50

BSNT_00233___     51 AGTACAAGAGTACACACGCTGTGAACGCTGCGGACGTCCGCATTCAGTCA    100
                     |||.|||||||||||.||||||||||||||||||||||||||.|||||||
RBAM_001540__     51 AGTGCAAGAGTACACTCGCTGTGAACGCTGCGGACGTCCGCACTCAGTCA    100

BSNT_00233___    101 TTCGTAAATTTAAACTTTGCCGTATTTGTTTCCGTGAGCTTGCATATAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001540__    101 TTCGTAAATTTAAACTTTGCCGTATTTGTTTCCGTGAGCTTGCATATAAA    150

BSNT_00233___    151 GGACAAATTCCTGGCGTGAAAAAAGCCAGCTGGTAA    186
                     ||||||||||||||||||||||||||||||||||||
RBAM_001540__    151 GGACAAATTCCTGGCGTGAAAAAAGCCAGCTGGTAA    186


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