Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00234 and RBAM_001550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_00234___rpsH.1.9828.seq
# -bsequence dna-align/RBAM_001550___rpsH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00234___rpsH-RBAM_001550___rpsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00234___rpsH-RBAM_001550___rpsH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00234___rpsH
# 2: RBAM_001550___rpsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 391/399 (98.0%)
# Similarity: 391/399 (98.0%)
# Gaps: 0/399 ( 0.0%)
# Score: 1923.0
#
#
#=======================================
BSNT_00234___ 1 ATGGTTATGACAGATCCAATTGCAGATATGCTAACTCGTATTCGCAATGC 50
||||||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_001550__ 1 ATGGTTATGACAGATCCAATTGCAGATATGCTGACTCGTATTCGCAATGC 50
BSNT_00234___ 51 AAACATGGTACGTCATGAGAAGCTTGAAATTCCTGCTTCTAAATTGAAAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001550__ 51 AAACATGGTACGTCATGAGAAGCTTGAAATTCCTGCTTCTAAATTGAAAA 100
BSNT_00234___ 101 GAGAAATTGCTGAAATTTTAAAGCGTGAAGGTTTCATTCGTGACGTTGAG 150
|||||||||||||.||||||||||||||||||||||||||||||||||||
RBAM_001550__ 101 GAGAAATTGCTGACATTTTAAAGCGTGAAGGTTTCATTCGTGACGTTGAG 150
BSNT_00234___ 151 TTCGTAGAAGACAGCAAACAAGGTATTATCCGCGTTTTCTTGAAATACGG 200
||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_001550__ 151 TTCGTAGAAGACAGCAAACAAGGTATCATCCGCGTTTTCTTGAAATACGG 200
BSNT_00234___ 201 ACAAAACAACGAGCGCGTTATCACTGGTCTTAAAAGAATCAGCAAGCCTG 250
|||||||||||||||||||||||||||||||||||||||||||||.||.|
RBAM_001550__ 201 ACAAAACAACGAGCGCGTTATCACTGGTCTTAAAAGAATCAGCAAACCAG 250
BSNT_00234___ 251 GTTTGCGTGTTTATGCTAAATCTAATGAAGTACCTCGCGTACTTAACGGT 300
||||||||||.||.||||||||.|||||||||||||||||||||||||||
RBAM_001550__ 251 GTTTGCGTGTATACGCTAAATCAAATGAAGTACCTCGCGTACTTAACGGT 300
BSNT_00234___ 301 CTTGGAATCGCGATTATTTCTACATCACAAGGTGTTTTAACGGACAAAGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001550__ 301 CTTGGAATCGCGATTATTTCTACATCACAAGGTGTTTTAACGGACAAAGA 350
BSNT_00234___ 351 AGCCCGTGCAAAACAAGCTGGTGGAGAAGTTCTAGCATACGTTTGGTAA 399
|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001550__ 351 AGCCCGTGCAAAACAAGCTGGTGGAGAAGTTCTAGCATACGTTTGGTAA 399
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