Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00236 and RBAM_001570

See Amino acid alignment / Visit BSNT_00236 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_00236___rplR.1.9828.seq
#    -bsequence dna-align/RBAM_001570___rplR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00236___rplR-RBAM_001570___rplR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00236___rplR-RBAM_001570___rplR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00236___rplR
# 2: RBAM_001570___rplR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity:     322/363 (88.7%)
# Similarity:   322/363 (88.7%)
# Gaps:           0/363 ( 0.0%)
# Score: 1446.0
# 
#
#=======================================

BSNT_00236___      1 ATGATTACGAAAACTAGCAAAAATGCTGCTCGTCTTAAAAGACACGCTCG     50
                     ||||||||||||||||||||||||||||||||||..||||||||.||.||
RBAM_001570__      1 ATGATTACGAAAACTAGCAAAAATGCTGCTCGTCAAAAAAGACATGCCCG     50

BSNT_00236___     51 TGTTCGCGCTAAACTTTCCGGTACTGCTGAAAGACCGCGCCTGAACGTTT    100
                     ||||||.|||||||||||.||.||.|||||||||||.||.|||||.||.|
RBAM_001570__     51 TGTTCGTGCTAAACTTTCAGGCACAGCTGAAAGACCTCGTCTGAATGTGT    100

BSNT_00236___    101 TCCGTTCTAACAAGCACATTTACGCTCAAATCATCGATGATGTAAATGGT    150
                     |||||||.|||||.||||||||.||||||||||||||||||||||||||.
RBAM_001570__    101 TCCGTTCAAACAAACACATTTATGCTCAAATCATCGATGATGTAAATGGC    150

BSNT_00236___    151 GTAACACTTGCTAGTGCATCTACTCTCGATAAAGACTTGAACGTTGAAAG    200
                     ||.||||||||||||||.|||||||||||||||||.||||||||.|||||
RBAM_001570__    151 GTTACACTTGCTAGTGCCTCTACTCTCGATAAAGATTTGAACGTGGAAAG    200

BSNT_00236___    201 CACTGGAGATACTTCTGCTGCTACTAAAGTTGGAGAATTAGTTGCAAAAC    250
                     ||||||.||.|...||||||||.|||||||.||.|||.|.|||||.||||
RBAM_001570__    201 CACTGGTGACAGCGCTGCTGCTGCTAAAGTCGGTGAACTCGTTGCGAAAC    250

BSNT_00236___    251 GCGCTGCTGAAAAAGGCATTTCTGACGTAGTATTTGACCGTGGCGGATAC    300
                     |||||.||||.|||||..||||||||||||||||||||||.|||||||||
RBAM_001570__    251 GCGCTTCTGAGAAAGGTGTTTCTGACGTAGTATTTGACCGCGGCGGATAC    300

BSNT_00236___    301 TTATACCATGGACGTGTAAAAGCTTTGGCTGATGCCGCTCGTGAAGCTGG    350
                     ||||||||||||||||||||||||.||||.|||||.|||||||||||.||
RBAM_001570__    301 TTATACCATGGACGTGTAAAAGCTCTGGCCGATGCAGCTCGTGAAGCCGG    350

BSNT_00236___    351 ACTTAAATTTTAA    363
                     |||.|||||||||
RBAM_001570__    351 ACTGAAATTTTAA    363


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