Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00311 and RBAM_002120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence dna-align/BSNT_00311___feuA.1.9828.seq
# -bsequence dna-align/RBAM_002120___feuA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00311___feuA-RBAM_002120___feuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00311___feuA-RBAM_002120___feuA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00311___feuA
# 2: RBAM_002120___feuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 973
# Identity: 763/973 (78.4%)
# Similarity: 763/973 (78.4%)
# Gaps: 35/973 ( 3.6%)
# Score: 2993.0
#
#
#=======================================
BSNT_00311___ 1 ATGAAAAAGAT-----ATCTCTTACCTTATTAATCTTACTTCTCGCGCTG 45
|||||.|| || .||.|||.|.|.||| ||.|||.|.||..|.
RBAM_002120__ 1 ATGAAGAA-ATTGGCATTCGCTTTCATGATT----TTGCTTTTGGCTTTC 45
BSNT_00311___ 46 ACGGCGGCAGCTTGCGGCAGCAAAAATGAATCAACTG--CCAGCAAGGCA 93
|||||.||.||||||||.|||..| |||.||.||| .|||||||..|
RBAM_002120__ 46 ACGGCCGCGGCTTGCGGAAGCTCA---GAAACATCTGATACAGCAAGTAA 92
BSNT_00311___ 94 AGCG---GCACAGCATCT---GAGAAGAAGAAAATTGAATACCTTGATAA 137
|| | |.|| ||.||| ||.||.||||||||.|||||.||.|..||
RBAM_002120__ 93 AG-GAAAGGAC-GCTTCTTCAGATAAAAAGAAAATCGAATATCTCGGAAA 140
BSNT_00311___ 138 AACATATGAAGTAACTGTACCGACAGACAAAATCGCCATTACGGGAAGCG 187
||||||||||||.|..|..|||||.|||||||||||||||||.||.||||
RBAM_002120__ 141 AACATATGAAGTCAAAGCGCCGACTGACAAAATCGCCATTACAGGCAGCG 190
BSNT_00311___ 188 TTGAATCAATGGAAGACGCGAAATTGCTTGACGTTCATCCGCAAGGCGCA 237
|.|||||||||||||||||.|||||||||||||||||||||..|||.|||
RBAM_002120__ 191 TAGAATCAATGGAAGACGCCAAATTGCTTGACGTTCATCCGGCAGGAGCA 240
BSNT_00311___ 238 ATTTCATTCTCCGGCAAATTCCCTGATATGTTCAAAGACATCACTGATAA 287
|||||.|||||||||||||||||.||..||||.|||||.||.||.|||||
RBAM_002120__ 241 ATTTCTTTCTCCGGCAAATTCCCGGAACTGTTTAAAGATATTACAGATAA 290
BSNT_00311___ 288 AGCCAAACCAACCGGAGAAAAAATGGAGCCAAATATTGAAAAGATTCTTG 337
|.||..|.|.||.||||||||||||.||||.|||||.|||||.|||||||
RBAM_002120__ 291 ATCCGTATCTACGGGAGAAAAAATGCAGCCGAATATGGAAAAAATTCTTG 340
BSNT_00311___ 338 AAATGAAGCCAGATGTTATCCTTGCTTCAACAAAGTTTCCGGAAAAAACG 387
|..||.||||.||.||.||.||.||.|||||.||.||.||||||||||||
RBAM_002120__ 341 AGCTGCAGCCGGACGTCATTCTGGCATCAACCAAATTCCCGGAAAAAACG 390
BSNT_00311___ 388 CTGCAAAAAATCAGCACAGCAGGCAC------GACGATCCCAGTTTCTCA 431
.||.|||||.|.||| ||||| .||||||||.||.|||||
RBAM_002120__ 391 TTGAAAAAATTGAGC------GGCACCGCTGAAACGATCCCTGTCTCTCA 434
BSNT_00311___ 432 TATCTCTTCAAACTGGAAGGAAAACATGATGCTGCTTGCCCAACTGACCG 481
||||||.|||||||||||.|||||||||||||||||.|||||.||.||.|
RBAM_002120__ 435 TATCTCATCAAACTGGAAAGAAAACATGATGCTGCTCGCCCAGCTTACAG 484
BSNT_00311___ 482 GAAAAGAGAAAAAAGCAAAGAAAATTATTGCAGACTATGAACAGGATCTA 531
..||||||||||||||.||.|||||.||.|||||.||.||||||||.||.
RBAM_002120__ 485 ATAAAGAGAAAAAAGCGAAAAAAATCATCGCAGATTACGAACAGGACCTG 534
BSNT_00311___ 532 AAAGAAACAAAAACAAAAATCAACGATAAAGCGAAAGATTCAAAAGCGCT 581
|||.|.|||||||||||.||||||...|||||||||.|.|||||.|||||
RBAM_002120__ 535 AAAAAGACAAAAACAAAGATCAACAGCAAAGCGAAACAGTCAAACGCGCT 584
BSNT_00311___ 582 TGTCATTAGAATTAGACAAGGCAACATTTACATTTACCCTGAACAGGTGT 631
.|||||.|||||.|||||||||||.|||||.|||||.||||||||.||.|
RBAM_002120__ 585 GGTCATCAGAATCAGACAAGGCAATATTTATATTTATCCTGAACAAGTAT 634
BSNT_00311___ 632 ATTTCAACTCCACACTATACGGTGATTTAGGCCTTAAGGCGCCGAACGAA 681
|||||||||||||.||.|||||||||||||||||.|||||||||.|||||
RBAM_002120__ 635 ATTTCAACTCCACGCTTTACGGTGATTTAGGCCTGAAGGCGCCGGACGAA 684
BSNT_00311___ 682 GTAAAAGCTGCAAAAGCGCAAGAGCTGATTTCATTAGAAAAATTAAGTGA 731
||.|||||.||.||||||||.||.||||||||..|.|||||||||||.||
RBAM_002120__ 685 GTCAAAGCGGCGAAAGCGCAGGAACTGATTTCTCTTGAAAAATTAAGCGA 734
BSNT_00311___ 732 AATGAACCCGGACCATATTTTCGTCCAATTTTCTGATGATGAAAATGCAG 781
|||||||||.||||||||.|||||.|||||.||||||||.|||||.||||
RBAM_002120__ 735 AATGAACCCTGACCATATCTTCGTACAATTCTCTGATGACGAAAACGCAG 784
BSNT_00311___ 782 ACAAACCTGATGCCTTAAAAGATTTAGAGAAAAATCCAATCTGGAAAAGC 831
|.||.||.||.||.||.|||||.||||||||||||||.||||||||.|||
RBAM_002120__ 785 ATAAGCCGGACGCTTTGAAAGACTTAGAGAAAAATCCGATCTGGAAGAGC 834
BSNT_00311___ 832 CTTAAAGCAGTCAAAGAAGATCATGTGTATGTCAACTCAGTGGACCCTCT 881
||.||.|||||||||.||||.|||||.||.|||||..|..|.||.||..|
RBAM_002120__ 835 CTGAAGGCAGTCAAAAAAGACCATGTATACGTCAATACGATTGATCCATT 884
BSNT_00311___ 882 CGCACAAGGCGGCACAGCTTGGAGCAAAGTCCGTTTCCTGAAAGCGGCTG 931
.||.||||||||.||.||.|||||.|||.||.|.|||.|..|.|..||.|
RBAM_002120__ 885 AGCCCAAGGCGGAACCGCGTGGAGTAAAATCAGCTTCTTACAGGTTGCGG 934
BSNT_00311___ 932 CTGAAAAATTGACACAAAACTAA 954
||||.||||||||.|||.|||||
RBAM_002120__ 935 CTGACAAATTGACTCAAGACTAA 957
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