Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00388 and RBAM_002650
See
Amino acid alignment /
Visit
BSNT_00388 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00388___ybfG.1.9828.seq
# -bsequence dna-align/RBAM_002650___ybfG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00388___ybfG-RBAM_002650___ybfG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00388___ybfG-RBAM_002650___ybfG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00388___ybfG
# 2: RBAM_002650___ybfG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2242
# Identity: 1715/2242 (76.5%)
# Similarity: 1715/2242 (76.5%)
# Gaps: 110/2242 ( 4.9%)
# Score: 6557.5
#
#
#=======================================
BSNT_00388___ 1 ATGGTTGATGAAATGGTCTT--AATCACACAGCAATGGCTAAACGATACG 48
||| ||.|||||||||.| || |||||.||||||||.||.||.|||
RBAM_002650__ 1 ATG---GACGAAATGGTCCTGGAA--ACACAACAATGGCTGAATGAGACG 45
BSNT_00388___ 49 TACAGCGGCAAACATGGGTATAACCCAGTTGAAGAAAGCGGGAAAACTGG 98
||||..||||.|||.|||||.|||..|||....||||.|||.|||||.||
RBAM_002650__ 46 TACAAAGGCAGACACGGGTACAACAAAGTGCCGGAAAACGGAAAAACGGG 95
BSNT_00388___ 99 GTGGGATACAATCTACGGTCTGACTCGGGCGCTTCAAATTGAATTGGGTA 148
.||||||||.||.|||||||||||.|||||||||||||||||..|.||||
RBAM_002650__ 96 CTGGGATACCATTTACGGTCTGACACGGGCGCTTCAAATTGAGCTTGGTA 145
BSNT_00388___ 149 TCTCAGAGCCAGCCGATAACTTCGGGCCGACAACACAGCGCTTATTTAAG 198
|.|||||.||.||||||||||||||.|||||.|||||..|.||.||||||
RBAM_002650__ 146 TTTCAGAACCTGCCGATAACTTCGGACCGACGACACAAAGATTGTTTAAG 195
BSNT_00388___ 199 CCTCTTAAACGCCAAGCTCCAGATTCAAAACCAAGCAACATGAATTTTAT 248
||..|.|||...||.|||||.|||||.||.||.|..||||||||||..||
RBAM_002650__ 196 CCGTTGAAAAAGCAGGCTCCCGATTCTAAGCCGACAAACATGAATTACAT 245
BSNT_00388___ 249 TTTACAAGGGGCTTTATGGTGTAAAGGCTTTAATCCCGGCGGTTTTACAG 298
|.|.||||||||..|.|||||||||||.|||||.||||||||.|||.|||
RBAM_002650__ 246 TCTGCAAGGGGCGCTGTGGTGTAAAGGTTTTAACCCCGGCGGATTTTCAG 295
BSNT_00388___ 299 GCGTCTTTTACGAAAAAACAGAAAATGCGGTAAAAGAATTTCAAAAAGCT 348
||||.||.||.|||||.||.||||..||.||||||||.|||||||||||.
RBAM_002650__ 296 GCGTTTTCTATGAAAATACCGAAAGCGCTGTAAAAGAGTTTCAAAAAGCG 345
BSNT_00388___ 349 GCCGGACTGACAACACAGGATGGGATTGTCAC--CACGTTAATTATGAAA 396
|||||.||.||.|..||.||.||.||.||||| ||| |.|||||||||
RBAM_002650__ 346 GCCGGGCTCACTAAGCAAGACGGCATCGTCACGGCAC--TCATTATGAAA 393
BSNT_00388___ 397 GCCTTATTAGACATGAGCGCTTTTAAGCTGGTGTCTGGGGGTGATTCAAG 446
|||||..|.||.||||||||||||....|.||..|.||.||.||...|||
RBAM_002650__ 394 GCCTTGCTGGATATGAGCGCTTTTCGATTAGTAGCGGGAGGCGACAAAAG 443
BSNT_00388___ 447 AATTCGCCAGATTCAACAAAACTTAAATCGAGACTACAATGACTATATCG 496
|||.|||||.||.||.||.|||.|.||.||.||.|||||||||||.||||
RBAM_002650__ 444 AATCCGCCAAATCCAGCAGAACCTGAACCGGGATTACAATGACTACATCG 493
BSNT_00388___ 497 GGTTAATGCCTTGTGACGGACTGTATGGCCGCGATACAAATAAAGCTCTT 546
|.||.||||||||||||||..|.||||.||||||||||||.||.|||||.
RBAM_002650__ 494 GCTTGATGCCTTGTGACGGCTTATATGCCCGCGATACAAACAAGGCTCTC 543
BSNT_00388___ 547 ATTTATGCCCTGCAAAAAGAAGAAGGCATGAGCACAAGTGTTGCCAATGG 596
||||||||||||||||||||||||.|||||||||||||.||.||||||||
RBAM_002650__ 544 ATTTATGCCCTGCAAAAAGAAGAAAGCATGAGCACAAGCGTCGCCAATGG 593
BSNT_00388___ 597 ATTTTTCGGAAACGGCACCACAAGTTTATGCCCTACTTTAACTCCCGGCG 646
|||||||||||||||.||.||.||.|||||||||||.||.||||||||||
RBAM_002650__ 594 ATTTTTCGGAAACGGGACGACCAGCTTATGCCCTACCTTGACTCCCGGCG 643
BSNT_00388___ 647 ATTCAAGAACAGGATTTGTCTTAATTGTTCAGTACGCCCTCTATTGTAAC 696
|||||.|.|||||.|||||.||.|||||.||.|||||.||.||.|||||.
RBAM_002650__ 644 ATTCACGGACAGGCTTTGTTTTGATTGTCCAATACGCGCTTTACTGTAAT 693
BSNT_00388___ 697 GGAAAATCGTTCGATCCTGGTGAGTTTGACGGCAAATATGGTGTGGGTGT 746
||..||.||||.|||||.|||||.||.|||||.|||||.||.||.||.||
RBAM_002650__ 694 GGGGAAGCGTTTGATCCCGGTGAATTCGACGGAAAATACGGCGTCGGAGT 743
BSNT_00388___ 747 TGTTTCAGCTGTTAAAGCATTTCAAGAGTTCATGCGCCTGCCGCAAACAG 796
|||.||.||.||.|||||.||||||.||||.|||.||||||||||.||.|
RBAM_002650__ 744 TGTATCGGCAGTGAAAGCTTTTCAAAAGTTTATGTGCCTGCCGCAGACCG 793
BSNT_00388___ 797 GTTATGCAGATATGCCAACCATTAAAGCTTTATTATCAAGCTCAGGAGAC 846
|||||||.||.|||||.||.||||||||||||||||||||||||||.|||
RBAM_002650__ 794 GTTATGCGGACATGCCGACGATTAAAGCTTTATTATCAAGCTCAGGCGAC 843
BSNT_00388___ 847 ACAACTCGCGCCGCTTCTGCTTGTGACACTGCTACAATTATAACCGCAGA 896
|||||.||.||.|||||..||||||||||.|||.|.|||.|.||.|||||
RBAM_002650__ 844 ACAACGCGGGCTGCTTCAACTTGTGACACCGCTGCCATTTTGACGGCAGA 893
BSNT_00388___ 897 AAAAGCTCAAACACTGCGGAATAACGGTTATAAAACGGTTGGCAGATATT 946
.|..|||.||||..||||..|.||.||.|||||.|..||.||.||||||.
RBAM_002650__ 894 TACGGCTAAAACTTTGCGTGAGAATGGCTATAAGATCGTGGGAAGATATC 943
BSNT_00388___ 947 TGACCGGAAATGTGCGGACAAGCAGCGGCCTCACATCAAAAGCCCTGACA 996
|||||||.||||||||||||||||||||.||.|||||.|||||..|.||.
RBAM_002650__ 944 TGACCGGGAATGTGCGGACAAGCAGCGGACTGACATCGAAAGCGTTAACG 993
BSNT_00388___ 997 TCTAAAGAGCTTGCAGTTATTCTTGATGCCGGATTGAAG-GTTTTCCCAA 1045
||.|||||.|||.|....|||.|..|||||||.|| ||| ||.||.||.|
RBAM_002650__ 994 TCAAAAGAACTTTCCACGATTTTCAATGCCGGCTT-AAGCGTGTTTCCGA 1042
BSNT_00388___ 1046 TTTATCAAGACGGCGGCTATGAATCTTCTTATTTTGTCAAAGACCAAGGC 1095
|||||||.|||||||||||||||||||||||||||||.|||||.|||||.
RBAM_002650__ 1043 TTTATCAGGACGGCGGCTATGAATCTTCTTATTTTGTAAAAGATCAAGGA 1092
BSNT_00388___ 1096 ACAAGAGATGCATATAGTGCCGCTTCTGCTGCTAGAAGATTAGGTTTTCC 1145
||.||||||||.||.||.||.||.||.||.||..||||||||||||||||
RBAM_002650__ 1093 ACGAGAGATGCGTACAGCGCTGCATCAGCCGCCCGAAGATTAGGTTTTCC 1142
BSNT_00388___ 1146 GTCAGGCACGACCATTTATTTCGCTGTCGATTTTGATGCATACGATTATG 1195
||||||.|||||||||||.||.||.||||||||.|||||.||.|||||||
RBAM_002650__ 1143 GTCAGGAACGACCATTTACTTTGCGGTCGATTTCGATGCGTATGATTATG 1192
BSNT_00388___ 1196 AAGTGACCGATAAAATCATTCCTTATTTCCAAGAGATTAAGTCAGCATTT 1245
||||.||.|||||||||||||||||.||||||||.||.||||||||.|||
RBAM_002650__ 1193 AAGTCACGGATAAAATCATTCCTTACTTCCAAGAAATCAAGTCAGCTTTT 1242
BSNT_00388___ 1246 ACAAAAATGCAGACATTTTCAACCGCACCTAAGTATGAAATAGGGGTTTA 1295
|..|||||||||.|.||.|||||.||.||.||.||||||||.|||||.||
RBAM_002650__ 1243 ATGAAAATGCAGGCGTTCTCAACTGCGCCGAAATATGAAATCGGGGTATA 1292
BSNT_00388___ 1296 CGGACCAAGAAACATTTGTATCCGTACATCAGAAGCAGGAATGACAAAGT 1345
||||||.|||||||||||||||||.||||||||||||||..||||.||.|
RBAM_002650__ 1293 CGGACCGAGAAACATTTGTATCCGGACATCAGAAGCAGGTCTGACCAAAT 1342
BSNT_00388___ 1346 ATAGTTTTGTGGCAAATATGTCAACAGGATTTAGCGGCAATCTCGGCTAT 1395
||||.|||...||.||.|||||.||.|||||.||||||||.|||||.||.
RBAM_002650__ 1343 ATAGCTTTACAGCTAACATGTCGACCGGATTCAGCGGCAACCTCGGATAC 1392
BSNT_00388___ 1396 CCGATGCCAAACAATTGGGCCTTTGATCAATTTTATGAAGGAACCATCGG 1445
||||||||.||.||.|||||.|||||||||||||||||||||||.|||||
RBAM_002650__ 1393 CCGATGCCGAAAAACTGGGCTTTTGATCAATTTTATGAAGGAACGATCGG 1442
BSNT_00388___ 1446 AAGCGGCTCTGGAAGCATCGGGATTGATAAAGACGGATTTTCAGGAAGAG 1495
||||||..|.||||...|||..|||||.||||||||||..||.||||.||
RBAM_002650__ 1443 AAGCGGAGCGGGAAAAGTCGCCATTGACAAAGACGGATACTCCGGAAAAG 1492
BSNT_00388___ 1496 ACTCAGGTGCAAGCAATGTAAATCCGCCGTCTGATCCGGTATATGATGCA 1545
||||.||||.|||||..||..|||||||.||||||||.||.|||||||||
RBAM_002650__ 1493 ACTCGGGTGTAAGCAGCGTCCATCCGCCTTCTGATCCTGTGTATGATGCA 1542
BSNT_00388___ 1546 AGGCTGCGTACACTGACAGACATTTTATCTACCATTCCGGCTTTAGAAAA 1595
||.|||||.||||||||.||.||||||.|.||||||||.|||||||||||
RBAM_002650__ 1543 AGACTGCGCACACTGACGGATATTTTAACAACCATTCCTGCTTTAGAAAA 1592
BSNT_00388___ 1596 TCTAACAAGTTTGGCAAACGCGATGTTTGAATTTGATACGACAGAAACCA 1645
|.||.|.|.|.|.||.||.||.|||||||||||.||.|.|||||||||||
RBAM_002650__ 1593 TATATCGAATCTTGCGAATGCCATGTTTGAATTCGACAAGACAGAAACCA 1642
BSNT_00388___ 1646 TTTTCACATCACCTGAGTTGGATATTATTCTATCAACTTCACTTCTGGCA 1695
|||...||||||||||..||||||||.||.||||.|||||||||.|||||
RBAM_002650__ 1643 TTTATGCATCACCTGAAATGGATATTCTTTTATCTACTTCACTTTTGGCA 1692
BSNT_00388___ 1696 ACCATACCAAGTGAAGGTTCACCAAACACAATTACCATTACAAATGGTAA 1745
||..|.|||||.||||||||.||.||||||.||||||||||||||||.||
RBAM_002650__ 1693 ACAGTGCCAAGCGAAGGTTCTCCCAACACAGTTACCATTACAAATGGCAA 1742
BSNT_00388___ 1746 ACCAGGTGCCTATATCACGGGTTTATTGGGCGACACTCAAACGTCTC--T 1793
|||.||.||||||||.||.|||.|..||| ||.|.|||.|.||||| |
RBAM_002650__ 1743 ACCGGGAGCCTATATTACCGGTCTGATGG--GAGATTCACAAGTCTCTTT 1790
BSNT_00388___ 1794 CACTGCGTCACAAATCGACTCTTATCAAAACCTTTTAAATAGTCTGAGCT 1843
.||.||.||||||||.||.||.|||||||||||..|.||.||||||||||
RBAM_002650__ 1791 TACAGCATCACAAATTGATTCCTATCAAAACCTGCTTAACAGTCTGAGCT 1840
BSNT_00388___ 1844 TATCAGTACGCAACGGTTATTTGGAGGTTTATGTAAATCCAACAGCTGAA 1893
|.|||||.||||||||||||||.||.||.|||||.|||||..|.||.|.|
RBAM_002650__ 1841 TGTCAGTCCGCAACGGTTATTTAGAAGTGTATGTCAATCCGGCTGCAGGA 1890
BSNT_00388___ 1894 TCTTTAAACATTCAAATTAAAATCTATACACCTGATATTCCAGTCGGTGA 1943
||..|.||.||||||.|||||||.|||||||||||||||||.||||||||
RBAM_002650__ 1891 TCGCTGAATATTCAATTTAAAATTTATACACCTGATATTCCGGTCGGTGA 1940
BSNT_00388___ 1944 CAATGTCACAACTGGACTAACGACTACGATTACGTTTAAAATAAAGACGT 1993
||.||..||||||||||||||.|||||.|||||.|||||||||||
RBAM_002650__ 1941 CAGTGCTACAACTGGACTAACAACTACCATTACATTTAAAATAAA----- 1985
BSNT_00388___ 1994 ACAAGGGAG-TACCAGTTAC--GTCTCCCGAGAGTGAATTAGCGT-TA-- 2037
||||..||| |.|..|||.| |..|||..|||| || ||
RBAM_002650__ 1986 ACAAAAGAGCTTCAGGTTGCCGGATTCCGAAGAG---------GTGTACT 2026
BSNT_00388___ 2038 -----GATTGG----CCGTCTTATGATCAATATTTATTCC----CTGTTG 2074
|||||| |.||| .||| ||.|| ||.|||
RBAM_002650__ 2027 CCCCGGATTGGGATTCTGTC--GTGA---------ATACCATGGCTATTG 2065
BSNT_00388___ 2075 TAGGTGTTGCTGCACTTTTACTAATTG--GGAATATGGGC---AGT-GAT 2118
.||| .||.|.|.||.|..|.|||| ||.||..|.|| ||| |.|
RBAM_002650__ 2066 CAGG---CGCAGGAATTATTGTTATTGTAGGGATCGGTGCTTTAGTCGTT 2112
BSNT_00388___ 2119 TTAACGAAC---AATAA--AGGAGTCAAAGTCGCTACCGCATTAT----- 2158
||| |.|| |||.| |||| |||.|.||.||.|
RBAM_002650__ 2113 TTA--GCACCTGAATTAGGAGGA---------GCTGCAGCCTTGTTCAGC 2151
BSNT_00388___ 2159 -CTGCTATGTTACTGGCCATTTTTGCTTATTATACTAGCTAA 2199
|.|.|.|.|.||| |||| ||| |||
RBAM_002650__ 2152 ACGGTTTTATCACT----ATTT------------CTA--TAA 2175
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.