Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00430 and RBAM_002790

See Amino acid alignment / Visit BSNT_00430 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence dna-align/BSNT_00430.1.9828.seq
#    -bsequence dna-align/RBAM_002790___ybgH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00430-RBAM_002790___ybgH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00430-RBAM_002790___ybgH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00430
# 2: RBAM_002790___ybgH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1450
# Identity:     952/1450 (65.7%)
# Similarity:   952/1450 (65.7%)
# Gaps:         248/1450 (17.1%)
# Score: 3623.5
# 
#
#=======================================

BSNT_00430         1 ATGCAGCAAATCCTGGAACAT---ATCG--TGGGTATCGCAAATGATCTT     45
                     ||||||.||.||||.|||.||   ||||  |.|     |||||||||.||
RBAM_002790__      1 ATGCAGGAATTCCTTGAAAATGTAATCGGCTCG-----GCAAATGATTTT     45

BSNT_00430        46 TTGTGGTCAAAGTTATTAATTGTTTTGCTCCTTTCTCTGGGAATCTATTT     95
                     ||.||||||||..|.|||||.||..||||.||||||||||||.|.|.|||
RBAM_002790__     46 TTATGGTCAAAACTGTTAATCGTACTGCTTCTTTCTCTGGGACTGTTTTT     95

BSNT_00430        96 TACGTTCAGGCTTAAGTTTTTACAGGTTCGCATGCTGAAAGAAATGGTCA    145
                     |||||||||....|||..|.|.||.||.|||||||||||.||||||.||.
RBAM_002790__     96 TACGTTCAGATCAAAGGGTCTGCAAGTCCGCATGCTGAAGGAAATGATCC    145

BSNT_00430       146 GGGTATT-AAGAGAAGGTGCTGCTTCCCGGTCGAAAAACACCATTTCTCC    194
                     ||||.|| ||| |||||.||.||..|||||.|.|||||||.||||||.||
RBAM_002790__    146 GGGTTTTGAAG-GAAGGCGCGGCCGCCCGGACAAAAAACAGCATTTCCCC    194

BSNT_00430       195 GTTTCAAGCCTTTTGCATCAGCATGGCGGCCCGTGTCGGAACGGGAAATA    244
                     ||||||.||.|||||||||||.||||||||.|||||||||||.||.||||
RBAM_002790__    195 GTTTCAGGCATTTTGCATCAGTATGGCGGCGCGTGTCGGAACCGGGAATA    244

BSNT_00430       245 TTACGGGCATTGCCATCGCCATTGCACTCGGCGGGCCCGGTGCAATCTTC    294
                     ||||.||.||.|||||.||.||.|||||||||||.||.||.||.||.|||
RBAM_002790__    245 TTACCGGAATCGCCATTGCGATCGCACTCGGCGGTCCGGGCGCTATTTTC    294

BSNT_00430       295 TGGATGTGGATTATCGCCATTATCGGATCAGCATCCAGCTTTGTGGAAAG    344
                     |||||||||||||||||..|.|||||.||.||.||.||||||||.|||||
RBAM_002790__    295 TGGATGTGGATTATCGCAGTCATCGGTTCGGCTTCAAGCTTTGTTGAAAG    344

BSNT_00430       345 CACACTGGCTCAGATTTATAAAGTAAAAGATGTAAACGGCTTCCGCGGCG    394
                     |||.|||||.||.||||||||||||||||||..||||||.||||||||.|
RBAM_002790__    345 CACGCTGGCCCAAATTTATAAAGTAAAAGATCAAAACGGATTCCGCGGGG    394

BSNT_00430       395 GGCCGGCGTATTACATGGAAAAAGGGCTGAACAAAAGGTGGATGGGCGCG    444
                     |.|||||.||||||||||||||.||.|||||.|||.|.||||||||||||
RBAM_002790__    395 GCCCGGCCTATTACATGGAAAAGGGCCTGAAGAAACGCTGGATGGGCGCG    444

BSNT_00430       445 CTGTTCGCTGTGTTAATCACCTTATCGTTCGGTATCGTCTTCAACTCGGT    494
                     ||||||||.||.||||||||..|.||.|||||..|.||.||.||.||.||
RBAM_002790__    445 CTGTTCGCCGTATTAATCACACTGTCATTCGGGGTTGTTTTTAATTCCGT    494

BSNT_00430       495 TCAATCCAATACAGTCAGCCTTGCCTTTGAAAACGCGTTTGGCACAAACC    544
                     |||||||||||||.|||||.|.||||||.|||||||.||.|||||.|.||
RBAM_002790__    495 TCAATCCAATACAATCAGCGTCGCCTTTCAAAACGCATTCGGCACCAGCC    544

BSNT_00430       545 GCCTGACATTGGGACTCATTTTAATTGCTGTATTCGGC-ACGATTATTTT    593
                     |.||.||||||||..|.||||||||.|..||.|||||| .|| |.||.||
RBAM_002790__    545 GGCTTACATTGGGCATTATTTTAATCGTGGTTTTCGGCGGCG-TAATCTT    593

BSNT_00430       594 TGGCGGAGTCAAGCGCATTGCAAAGCTGGCTGAATCCATTGTCGTCGTAT    643
                     .|||||.|||||.||.|||||.||..||||.||||.|||.||.|||||.|
RBAM_002790__    594 CGGCGGCGTCAAACGAATTGCGAAAATGGCGGAATACATCGTAGTCGTCT    643

BSNT_00430       644 TGGCTGTCCTGTATATCGGAGTTGCGTTTTTCGTCATTTTCACCAACATT    693
                     ||||.||..|.||||||||.||.||.||.||.||||||.|.||.|||||.
RBAM_002790__    644 TGGCCGTTTTATATATCGGTGTCGCTTTCTTTGTCATTCTGACGAACATC    693

BSNT_00430       694 ACGCAGCTGCCAGGTGTGCTTGCGCTAATCGTGAAAAATGCGTTTGGTTT    743
                     ||.||..||||.||.||.||..||||||||||.|||||||||||.||..|
RBAM_002790__    694 ACCCAATTGCCCGGCGTTCTGTCGCTAATCGTAAAAAATGCGTTCGGCAT    743

BSNT_00430       744 TGATCAGGCCGCCGGCGGGGCTTTGGGCGCGGCACTCATGCAAGGCGTCA    793
                     |||||||||.||.|||||.|||||.||.|||||..|.||||||||.||.|
RBAM_002790__    744 TGATCAGGCAGCGGGCGGCGCTTTAGGTGCGGCCTTGATGCAAGGTGTAA    793

BSNT_00430       794 GACGGGGAATCTTTTCAAACGAAGCGGGAATGGGAAGCGCACCGAATGCC    843
                     ||||.||.||.||.|||||.||||||||.|||||||||||.|||||.||.
RBAM_002790__    794 GACGCGGGATTTTCTCAAATGAAGCGGGTATGGGAAGCGCTCCGAACGCG    843

BSNT_00430       844 GCTGCCACCGCCACAACAAGCCATCCCGTCAAACAGGGGCTGATCCAAGC    893
                     ||.||.||.||.|||||.|||||.||.||.|||||||||||.||.||.||
RBAM_002790__    844 GCGGCGACAGCTACAACGAGCCACCCGGTGAAACAGGGGCTCATTCAGGC    893

BSNT_00430       894 TTTTGGTGTACTGACAGATACACTGGTCATTTGTACAAGCACCGCCTTTA    943
                     .||.||.||.|||||.|||||.||.|||||||||||||||||.||..|||
RBAM_002790__    894 ATTCGGCGTCCTGACGGATACGCTCGTCATTTGTACAAGCACGGCGCTTA    943

BSNT_00430       944 TCATCCTGTTTTCGGATGCCTATCATACTCCGGGTCTGAGCGGAATCGC-    992
                     ||||..|.|||||.||.||.|||||....|||||.||||||||.||||| 
RBAM_002790__    944 TCATTTTATTTTCAGACGCGTATCACCAGCCGGGACTGAGCGGCATCGCG    993

BSNT_00430       993 CTTGACACAAGCCTCCCTCAGCTCCCATGTCGGATCATGGGCATCAGGCT   1042
                     ||| .|.||.|||.||.|.|||...||||||||..|||||||.|||||.|
RBAM_002790__    994 CTT-TCTCAGGCCGCCTTGAGCGATCATGTCGGCGCATGGGCTTCAGGTT   1042

BSNT_00430      1043 TTCTCG-CGATTC----TGATTTTGTTATTCGGATTCTGTGCTCTAATTG   1087
                     |.||.| ||  ||    ||.|||||   |||||.|||.|.|||||.||.|
RBAM_002790__   1043 TCCTTGCCG--TCTTAATGCTTTTG---TTCGGCTTCAGCGCTCTGATGG   1087

BSNT_00430      1088 GAAACTATTATTATGGCGAAACCAATATCGGCTTTTTGAACAAAAGCAAA   1137
                     |.|||||||||||.||.||||||||||||||.|||||.|.|.|.|.||||
RBAM_002790__   1088 GCAACTATTATTACGGAGAAACCAATATCGGATTTTTAAGCCAGAACAAA   1137

BSNT_00430      1138 AAACTGATTTTTGTCTACCGTATCGGCGTGCTGGCAATGATCGTGTTTGG   1187
                     |||..|.|.||..|.|||||.|||.|||||||.|.||||.|..||||.||
RBAM_002790__   1138 AAATGGCTGTTCATTTACCGCATCTGCGTGCTCGGAATGGTACTGTTCGG   1187

BSNT_00430      1188 CTGTGTTGCCAAAGTCCAGCTCGTCTAG----------------------   1215
                     ||||.||.|||||||||||||.||.|.|                      
RBAM_002790__   1188 CTGTATTTCCAAAGTCCAGCTTGTGTGGGATATGGCTGACTTGTTCATGG   1237

BSNT_00430      1215 --------------------------------------------------   1215
                                                                       
RBAM_002790__   1238 GCTTAATGGTGGTCGTGAACTTAATCGCGATTTTCCTTCTGTCGAAAAAA   1287

BSNT_00430      1215 --------------------------------------------------   1215
                                                                       
RBAM_002790__   1288 GCGTTTGCCGCTTTGAGCGATTATGCCCGGCAAAAGAAAGCCGGAAAGGA   1337

BSNT_00430      1215 --------------------------------------------------   1215
                                                                       
RBAM_002790__   1338 CCCCGTCTTTTACAGAGATGTGCTCCCTGATGATGACGGGATCGACTGCT   1387

BSNT_00430      1215 --------------------------------------------------   1215
                                                                       
RBAM_002790__   1388 GGGAGTATTCAGACATCGCGAAAAGTGCGAAAGGCAAACACATTTCCTAA   1437


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