Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00449 and RBAM_002840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_00449___yczA.1.9828.seq
# -bsequence dna-align/RBAM_002840___rtpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00449___yczA-RBAM_002840___rtpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00449___yczA-RBAM_002840___rtpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00449___yczA
# 2: RBAM_002840___rtpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 123/210 (58.6%)
# Similarity: 123/210 (58.6%)
# Gaps: 51/210 (24.3%)
# Score: 419.0
#
#
#=======================================
BSNT_00449___ 1 ------------------------------------------ATGGTCAT 8
|||||.||
RBAM_002840__ 1 GTGACTGGAGACGGACAGACAATCAAAAAAGGAGGGATATTCATGGTGAT 50
BSNT_00449___ 9 TGCAACTGATGATCTTGAGGTCGCATGTCCTAAATGTGAAAGA----GCG 54
.|||||.||.|||||||||.||.|.|||||..|.||||||.|| |||
RBAM_002840__ 51 CGCAACCGACGATCTTGAGCTCACGTGTCCGCATTGTGAAGGAACCGGCG 100
BSNT_00449___ 55 -GGAGAAATCGAAGGAACACCTTGCCCGGCCTGCAGCGGAAAAGGTGTTA 103
|||||| .|||||.||.||.||.|||...|||.|||..||.||.||.|
RBAM_002840__ 101 AGGAGAA--GGAAGGGACGCCCTGTCCGAAGTGCGGCGCGAAGGGCGTCA 148
BSNT_00449___ 104 TTCTGACTGCTCAAGGATATACGCTTCTGGATTTTATCCAAAAGCAT-TT 152
|..||||.|||||||||.|.|||||.|||.||||||||..||||||| ||
RBAM_002840__ 149 TATTGACCGCTCAAGGAAACACGCTGCTGCATTTTATCAGAAAGCATATT 198
BSNT_00449___ 153 GAATAAGTAA 162
| ||.|||.|
RBAM_002840__ 199 G-ATCAGTGA 207
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