Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00461 and RBAM_002920

See Amino acid alignment / Visit BSNT_00461 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence dna-align/BSNT_00461___cwlJ.1.9828.seq
#    -bsequence dna-align/RBAM_002920___cwlJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00461___cwlJ-RBAM_002920___cwlJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00461___cwlJ-RBAM_002920___cwlJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00461___cwlJ
# 2: RBAM_002920___cwlJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity:     343/430 (79.8%)
# Similarity:   343/430 (79.8%)
# Gaps:           2/430 ( 0.5%)
# Score: 1355.0
# 
#
#=======================================

BSNT_00461___      1 ATGGCGGTCGTGAGAGCAACGAGTGCGGATGTCGATTTGATGGCAAGGCT     50
                     |||||.|||||.|.|||..||||.||.|||.|.|||.|.|||||||||||
RBAM_002920__      1 ATGGCAGTCGTAAAAGCGTCGAGCGCCGATCTGGATCTAATGGCAAGGCT     50

BSNT_00461___     51 GCTCAGAGCGGAAGCGGAAGGCGAAGGCAAGCAGGGGATGCTGCTTGTCG    100
                     ||||||.||||||||||||||||||||.||||||||.|||||..|.||||
RBAM_002920__     51 GCTCAGGGCGGAAGCGGAAGGCGAAGGGAAGCAGGGAATGCTTTTGGTCG    100

BSNT_00461___    101 GCAACGTTGGAATTAATCGGCTGCGGGCGAATTGCTCAGATTTTAAAGGC    150
                     ||||.||.|||||.||||||.|||||||||||||.||.||||||||||||
RBAM_002920__    101 GCAATGTGGGAATCAATCGGGTGCGGGCGAATTGTTCTGATTTTAAAGGC    150

BSNT_00461___    151 CTCCGCACCATCAGGCAGATGATTTATCAGCCACACGCGTTTGAGGCTGT    200
                     ||.||||||||||||||||||.|.|.||||||.|||||||||||.||.||
RBAM_002920__    151 CTGCGCACCATCAGGCAGATGGTGTTTCAGCCGCACGCGTTTGAAGCGGT    200

BSNT_00461___    201 GACTCATGGATATTTTTATCAAAGGGCGCGAGATAGCGAGCGTGCCCTTG    250
                     ||||||.|||||.|||||.||.||..||||.||...||||||....||||
RBAM_002920__    201 GACTCACGGATACTTTTACCAGAGACCGCGTGAATCCGAGCGGAGGCTTG    250

BSNT_00461___    251 CACGCCGGTCGATTAATGGTGAAAGGCGCTGGCCTGCAAAATTTAGTTTA    300
                     |.||||||.|||||||.||.|||.||...|||||.||.||.||.|||.|.
RBAM_002920__    251 CCCGCCGGACGATTAACGGAGAACGGTTTTGGCCGGCTAAGTTCAGTCTG    300

BSNT_00461___    301 TGGTACTTCAGGCCGCAGGGGGACTGTCCAGCCCA-GTGGTATAACCAGC    349
                     |||||.||.|.|||||.|||..|||| ||.|||.| .||||||.|.||||
RBAM_002920__    301 TGGTATTTTAAGCCGCCGGGAAACTG-CCCGCCGACTTGGTATGATCAGC    349

BSNT_00461___    350 CGTTTGTGGCCAGATTTAAGTCACACTGCTTTTATCAGCCGACGGCGGAG    399
                     |||||||.||.|||||.||.||.||||||||.|||||||||||.|..||.
RBAM_002920__    350 CGTTTGTCGCGAGATTCAAATCCCACTGCTTCTATCAGCCGACAGGTGAA    399

BSNT_00461___    400 ACGTGTGAAAATGTATATAACACATTTTAG    429
                     |||||.|||||.||.||.||.||||||||.
RBAM_002920__    400 ACGTGCGAAAACGTGTACAATACATTTTAA    429


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