Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00514 and RBAM_003160

See Amino acid alignment / Visit BSNT_00514 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence dna-align/BSNT_00514___yceD.1.9828.seq
#    -bsequence dna-align/RBAM_003160___yceD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00514___yceD-RBAM_003160___yceD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00514___yceD-RBAM_003160___yceD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00514___yceD
# 2: RBAM_003160___yceD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     478/582 (82.1%)
# Similarity:   478/582 (82.1%)
# Gaps:           0/582 ( 0.0%)
# Score: 1974.0
# 
#
#=======================================

BSNT_00514___      1 ATGACAATTTCATTGGCAAAAGGACAAAAAGTAGATTTAACAAAAACAAA     50
                     |||.||||||||||||||||||||||||||||||||||.||.||||||||
RBAM_003160__      1 ATGGCAATTTCATTGGCAAAAGGACAAAAAGTAGATTTGACTAAAACAAA     50

BSNT_00514___     51 TCCGGGTCTTTCAAAGGTTGTTGTCGGTTTAGGCTGGGATACGAACAAGT    100
                     ||||||||||||.||.||.||||||||..|.|||||||||||.|||||.|
RBAM_003160__     51 TCCGGGTCTTTCTAAAGTCGTTGTCGGCCTTGGCTGGGATACAAACAAAT    100

BSNT_00514___    101 ATGACGGCGGACACGACTTTGATCTTGACTCAAGTGTGTTTTTGTTAGAC    150
                     |.|||||||||||.||.||||||.|.||.||.||.||.|||.|.|||.|.
RBAM_003160__    101 ACGACGGCGGACATGATTTTGATTTAGATTCCAGCGTCTTTCTATTAAAT    150

BSNT_00514___    151 GCCGCAGGCAAATGCGCGTCACCAAACGACTTTATTTTCTACAACCAGCT    200
                     |..|||||.|||||||||||.||..|.||.||.||||||||.||.|||||
RBAM_003160__    151 GAAGCAGGAAAATGCGCGTCGCCCGATGATTTCATTTTCTATAATCAGCT    200

BSNT_00514___    201 TGAAGGCGGCAACGGTTCAGTCGTTCATTCAGGCGACAACCTGACTGGTG    250
                     |||||||||.|||||.||.||||..||||||||||||||||||||.||..
RBAM_003160__    201 TGAAGGCGGAAACGGCTCTGTCGCACATTCAGGCGACAACCTGACAGGCC    250

BSNT_00514___    251 CTGGCGAAGGCGACGATGAGAATGTAAAAGTAAATCTCAGCGCTGTACCG    300
                     ..|||||||||||.||.||.|..||||.|||.||.||.|||||.||.||.
RBAM_003160__    251 AGGGCGAAGGCGATGACGAAAGCGTAAGAGTCAACCTGAGCGCGGTGCCC    300

BSNT_00514___    301 GCAAACATTGATAAAATCTCATTTGTTATTACCATTCACGATGCAGAAGC    350
                     ||....|||||.|||||.|||||.||.||.||.|||||.||.||.|||||
RBAM_003160__    301 GCGGCTATTGACAAAATTTCATTCGTCATCACGATTCATGAAGCGGAAGC    350

BSNT_00514___    351 GCGCAGCCAAAACTTTGGACAAGTATCAAACGCGTTTGTCCGCATTGTAA    400
                     ||||.||||||||||.||||||||.||.||||||||.||..|.|||||.|
RBAM_003160__    351 GCGCGGCCAAAACTTCGGACAAGTTTCCAACGCGTTCGTGAGAATTGTCA    400

BSNT_00514___    401 ATGAAGAAACAAATGAAGAGCTCATCCGTTACGATCTTGCAGAAGATTTC    450
                     |||||||.||||||||.|||||.|||||.||.|||||.||.|||||||||
RBAM_003160__    401 ATGAAGAGACAAATGAGGAGCTGATCCGCTATGATCTGGCTGAAGATTTC    450

BSNT_00514___    451 TCTATTGAAACGGCAATCATTGCAGGGGAGCTTTACAGACATAACGGCGA    500
                     ||.||||||||.||.||.||.|||||||||||||||||||||||||||||
RBAM_003160__    451 TCAATTGAAACAGCCATTATCGCAGGGGAGCTTTACAGACATAACGGCGA    500

BSNT_00514___    501 GTGGAAATTCTCCGCAATCGGCTCAGGCTACCAAGGCGGCCTTGCCCGCA    550
                     .||||||||.|||||.|||||||||||||||||||||||.||.|||||.|
RBAM_003160__    501 ATGGAAATTTTCCGCGATCGGCTCAGGCTACCAAGGCGGACTGGCCCGTA    550

BSNT_00514___    551 TTGCAACAGACTACGGTTTGCAAGTCGGTTAA    582
                     ||||.|||||.|||||..|||||.||||.|.|
RBAM_003160__    551 TTGCGACAGATTACGGCCTGCAAATCGGCTGA    582


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