Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00572 and RBAM_003470
See
Amino acid alignment /
Visit
BSNT_00572 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence dna-align/BSNT_00572___ycgP.1.9828.seq
# -bsequence dna-align/RBAM_003470___ycgP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00572___ycgP-RBAM_003470___ycgP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00572___ycgP-RBAM_003470___ycgP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00572___ycgP
# 2: RBAM_003470___ycgP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1243
# Identity: 1004/1243 (80.8%)
# Similarity: 1004/1243 (80.8%)
# Gaps: 14/1243 ( 1.1%)
# Score: 4065.5
#
#
#=======================================
BSNT_00572___ 1 ATGGAAGAGCTTTTAGAGAGAGTTTTTTCATTTTCAGATGTTGATAAGCT 50
|||||||||||||||||||||||||||||||||.|.||..|||||||..|
RBAM_003470__ 1 ATGGAAGAGCTTTTAGAGAGAGTTTTTTCATTTACGGACATTGATAAATT 50
BSNT_00572___ 51 GATTGATTTTATTAGCTATGAACTGCAAAAGCCAGTGATACTGGAAAGCG 100
.||||||||.||.||.||||||.||||.|||||.||.||.||||||||||
RBAM_003470__ 51 AATTGATTTCATCAGTTATGAATTGCAGAAGCCCGTTATTCTGGAAAGCG 100
BSNT_00572___ 101 CGGATTTCTTTTTGCTAGCCTATAATTCTTACTATATTAACCATTTTGAT 150
||||||||||||||||.||||||||||||||.||.|||||.||.||.||.
RBAM_003470__ 101 CGGATTTCTTTTTGCTTGCCTATAATTCTTATTACATTAATCACTTCGAC 150
BSNT_00572___ 151 TCTGCCAACCAGCAGACTATTTTTTCGAAAAAGTGTCCGGTCCAGATTTT 200
||.||||||||||||||.||.|||||.|||||.||.||.||.||||||||
RBAM_003470__ 151 TCCGCCAACCAGCAGACGATATTTTCAAAAAAATGCCCCGTGCAGATTTT 200
BSNT_00572___ 201 TGAGAGGTTTCTGAAGGACGGAATTATTGAAAAATTGAAAACAGAGCCTG 250
|||.|||||||||||||||||..|.||.|||||..|||||||.|..||||
RBAM_003470__ 201 TGAAAGGTTTCTGAAGGACGGGGTGATCGAAAAGCTGAAAACCGTTCCTG 250
BSNT_00572___ 251 AGCCTTTTCGCGTCAATAAAATTGAAAGCATTGGGTTAAACCAGAGGGTG 300
|.||.||.||.|||.|.|||||.||.||.||.||..|.||.|||||.|||
RBAM_003470__ 251 AACCGTTCCGTGTCGAAAAAATAGACAGTATCGGACTGAATCAGAGAGTG 300
BSNT_00572___ 301 GTCGTGAGTGCAAAGCACAAAGGGGAAGTCATGGGCTACATCTGGATTCA 350
||.||.||.|||||.||.|||||.|||||.||||||||||||||||||||
RBAM_003470__ 301 GTTGTAAGCGCAAAACATAAAGGCGAAGTGATGGGCTACATCTGGATTCA 350
BSNT_00572___ 351 GGAGCTGGACCAAAATCTGACGGATGAAGAGCTCGACTTTTTGTACGAGA 400
||||||.||||.|||..|||||||.||.||||||||.|||||.||.||.|
RBAM_003470__ 351 GGAGCTCGACCGAAACTTGACGGACGAGGAGCTCGATTTTTTATATGAAA 400
BSNT_00572___ 401 CCTCCTTCCATGTCGGGAAAATCATTTATAAAACGAATAAATTGAAACAG 450
|.||.|||||||||||.||||||||.|||||||||||.....||||||||
RBAM_003470__ 401 CTTCATTCCATGTCGGAAAAATCATCTATAAAACGAACCGGCTGAAACAG 450
BSNT_00572___ 451 GAAAAGGAAGAAAAAGCAGAGGATCTCATCAAACGGGCGATCTATCAGCA 500
|||||.|||||.|.|||.||.||.||..|.|||||||||||||.||||||
RBAM_003470__ 451 GAAAAAGAAGAGAGAGCGGAAGACCTGGTGAAACGGGCGATCTTTCAGCA 500
BSNT_00572___ 501 ATTTACCTCTGAGAAGGAACTCAGACGGGAAGCTGAAAGGATCAACACCG 550
|||..|||||||.|||||..||||.||||||||.||||.|||.|||.|||
RBAM_003470__ 501 ATTCTCCTCTGAAAAGGAGTTCAGGCGGGAAGCGGAAAAGATGAACGCCG 550
BSNT_00572___ 551 TGCTGCCTTCCATGTTTTCAGTTGTGATCCTGCACGCCGCAAATGGGGAT 600
|||||||.||..|.||||||||.||..|||||||||||||||||||||||
RBAM_003470__ 551 TGCTGCCGTCGGTTTTTTCAGTAGTCGTCCTGCACGCCGCAAATGGGGAT 600
BSNT_00572___ 601 GGGGAAGCGGTTGAGGATTTAAAGGAAAATATCAGGTCGTACCTGAATTT 650
|||||.||.||.||.|||.|.||||||||.||||..||||||.|||||||
RBAM_003470__ 601 GGGGAGGCAGTCGAAGATGTGAAGGAAAACATCAAATCGTACTTGAATTT 650
BSNT_00572___ 651 ACGGGATAAGGTCAGTCATGTCTTAACGATCGAATCAAATATTGTCATCG 700
.||||||||.||||||||.||||||||.||.||.||.|||||||||||||
RBAM_003470__ 651 GCGGGATAAAGTCAGTCACGTCTTAACCATTGATTCCAATATTGTCATCG 700
BSNT_00572___ 701 TCGTAGCGAGTTTTTCCCAAAAAAGCTCCGTCTCCTCAGCAGCTTCTGAG 750
||||.||.||.||.||.|||||||||||||.|.|.||.|||||.|||||.
RBAM_003470__ 701 TCGTCGCAAGCTTCTCGCAAAAAAGCTCCGGCACTTCGGCAGCATCTGAA 750
BSNT_00572___ 751 TTTATTAACAAGCTGTTAACACATTTTCACTTTCAAAAAATACCTACCCC 800
||.||..||||.|||.|.||.||||||||||||||.||.||.||.||.||
RBAM_003470__ 751 TTCATCCACAAACTGCTGACTCATTTTCACTTTCAGAAGATCCCCACTCC 800
BSNT_00572___ 801 TATTTATATCGGTATCGGAAACGAATATA--ATCA-CCTATTAAAACTTG 847
.||.||||||||.|||||.||.|||||.| |.|| || |.||.||.|
RBAM_003470__ 801 CATCTATATCGGAATCGGCAATGAATACAGCAGCATCC---TGAAGCTCG 847
BSNT_00572___ 848 GCAAGAGCTACACAGAAGCACTTGAAGTCATCAAAGCCGCAGAAATCACC 897
||||.||.||.|.|||.||.|||||||||||.||.|||||.|||||.|||
RBAM_003470__ 848 GCAAAAGTTATATAGAGGCCCTTGAAGTCATAAAGGCCGCCGAAATTACC 897
BSNT_00572___ 898 GGCAATCAGGAAAACATTCCATATGAATATGCCAAACTCGGCATTTACCG 947
||.||.||||||||.|||||.||.|||||....||.|||||.||||||||
RBAM_003470__ 898 GGAAACCAGGAAAATATTCCGTACGAATACAGTAAGCTCGGGATTTACCG 947
BSNT_00572___ 948 CTATTTAGAAAGCATCGAACAGAAAAATGAATTTTTAGAATACGAGAATA 997
||||.|.||||||||||||.|.|||||.|..|...|.|||||.| ||
RBAM_003470__ 948 CTATCTTGAAAGCATCGAAGAAAAAAACGCCTCACTGGAATATG----TA 993
BSNT_00572___ 998 AA----GATTTAGCTTTATTAAAAGCGAAAGACGAAGAAAGCAGCACTGA 1043
|| ||||||||.|||||||||||.||||||..|||||||||.||.||
RBAM_003470__ 994 AACGATGATTTAGCGTTATTAAAAGCCAAAGACAGAGAAAGCAGTACAGA 1043
BSNT_00572___ 1044 GCTGCTCAAAACCTTGGAAATCTATCTCCTCAACAACTGCAAAACAAAAC 1093
.|||||.|||||.||.|||||||||||||||||.||||||||||||||||
RBAM_003470__ 1044 ACTGCTGAAAACGTTAGAAATCTATCTCCTCAATAACTGCAAAACAAAAC 1093
BSNT_00572___ 1094 CAGCGGCAGAACAGCTGTTTATTCACCAAAATACATTGAATTACCGCATC 1143
||||.|||||||||||.||||||||.|||||.||||||||.|||||.|||
RBAM_003470__ 1094 CAGCCGCAGAACAGCTTTTTATTCATCAAAACACATTGAACTACCGTATC 1143
BSNT_00572___ 1144 AAACAGATTACTGAGATGACGTCGATCGATTTAAGCGATTTCAGAACGCG 1193
|||||||||..|||.|||||.||.||..||||||.|||.|||||.||..|
RBAM_003470__ 1144 AAACAGATTCTTGACATGACATCAATTAATTTAAACGACTTCAGGACAAG 1193
BSNT_00572___ 1194 GTGCCAGCTCTATCTCGATTTGATGCTGATGAAAAAGAAATAA 1236
|||||||||.||.||||||.|.||||||||||||||||.||||
RBAM_003470__ 1194 GTGCCAGCTGTACCTCGATATCATGCTGATGAAAAAGAGATAA 1236
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.