Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00576 and RBAM_003480
See
Amino acid alignment /
Visit
BSNT_00576 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence dna-align/BSNT_00576___ycgT.1.9828.seq
# -bsequence dna-align/RBAM_003480___ycgT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00576___ycgT-RBAM_003480___ycgT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00576___ycgT-RBAM_003480___ycgT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00576___ycgT
# 2: RBAM_003480___ycgT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1020
# Identity: 817/1020 (80.1%)
# Similarity: 817/1020 (80.1%)
# Gaps: 18/1020 ( 1.8%)
# Score: 3279.0
#
#
#=======================================
BSNT_00576___ 1 ATGGCTGAGAATCAAGAGGTATATGACGTTACGATTATAGGCGGGGGGCC 50
|||||.||.|||||.|||||.||||||||.||||||||||||||.||.||
RBAM_003480__ 1 ATGGCGGAAAATCATGAGGTGTATGACGTCACGATTATAGGCGGAGGCCC 50
BSNT_00576___ 51 GATTGGGCTGTTTACTGCTTTTTACTGCGGGATGCGGGAGCTGAAAACAA 100
|||.||.||||||.|.||||||||.|||||||||||.|||||||||||.|
RBAM_003480__ 51 GATCGGCCTGTTTGCGGCTTTTTATTGCGGGATGCGCGAGCTGAAAACGA 100
BSNT_00576___ 101 AGGTAATCGAATTTTTGCCGAAGCTCGGAGGGAAGGTGTCTTTATTCTTT 150
|.||.|||||.|||||||||..||||||||||||.||||||.|.||.||.
RBAM_003480__ 101 AAGTGATCGAGTTTTTGCCGCGGCTCGGAGGGAAAGTGTCTATGTTTTTC 150
BSNT_00576___ 151 CCTGAGAAAATCATTCGCGATATCGGCGGCATACCGGGGATTGCGGGAAA 200
|||||.||||||||.||.|||||||||||.|||||.||||||||.|||.|
RBAM_003480__ 151 CCTGAAAAAATCATCCGTGATATCGGCGGAATACCCGGGATTGCCGGAGA 200
BSNT_00576___ 201 GCAGCTGATCGAGCAGCTGAAGGAGCAGGCGGCAACATTTGATCCTGATA 250
.||||||||...||||||||||||.||||||||.||||||.|.||.||||
RBAM_003480__ 201 ACAGCTGATTACGCAGCTGAAGGAACAGGCGGCGACATTTAAGCCGGATA 250
BSNT_00576___ 251 TCGTATTGAATCAGCGTGTGACCGGGTTTGAACGCCTGGATGAAGGCACC 300
||||.|||||||||||.||||||||.||||||||.|||||.||.||.|||
RBAM_003480__ 251 TCGTGTTGAATCAGCGGGTGACCGGATTTGAACGGCTGGAAGACGGAACC 300
BSNT_00576___ 301 ATTGTACTGACGGGTTCTGAAGGGGAAAAGCACTATACAAGAACTGTAAT 350
|||||.|||....||||.|||||||||||||||||||||.|.||.||.||
RBAM_003480__ 301 ATTGTGCTGGAAAGTTCCGAAGGGGAAAAGCACTATACACGCACGGTGAT 350
BSNT_00576___ 351 TTTGGCTTGCGGCATGGGTACGCTTGAGGTCAATGAGTTTGACAGCGAGG 400
||||||...|||||||||.|||||||||||||||||..|||||||||.||
RBAM_003480__ 351 TTTGGCCGTCGGCATGGGGACGCTTGAGGTCAATGAACTTGACAGCGCGG 400
BSNT_00576___ 401 ATGCGGCCCGATATGCGGGCAAAAATCTTCATTATGGAGTGGAGAAGCTC 450
|||||..|||.|||.||||.||.||.|||||||||...|||||||||||.
RBAM_003480__ 401 ATGCGAGCCGTTATTCGGGAAAGAACCTTCATTATAAGGTGGAGAAGCTT 450
BSNT_00576___ 451 GATGCGTTTAAAGGGAAGCGCGTGGTGATATCAGGCGGCGGTGATACTGC 500
|||||||||..||..||||..||.|||||.|||||.||.||.|||||.||
RBAM_003480__ 451 GATGCGTTTCGAGATAAGCATGTCGTGATTTCAGGAGGGGGAGATACCGC 500
BSNT_00576___ 501 GGTCGATTGGGCTAATGAGCTTGAACCGATTGCGGCGTCTGTGACTGTCG 550
|||.||.|||||.||||||||.||||||||||||||||||||.||.|||.
RBAM_003480__ 501 GGTTGACTGGGCGAATGAGCTGGAACCGATTGCGGCGTCTGTTACCGTCT 550
BSNT_00576___ 551 TTCATCGGCGTGAGGAATTCGGCGGAATGGAAAGCAGCGTGACGAAAATG 600
|.||.||..|.|||||.||||||||..||||||||||||||.||||||||
RBAM_003480__ 551 TGCACCGCAGGGAGGAGTTCGGCGGTTTGGAAAGCAGCGTGGCGAAAATG 600
BSNT_00576___ 601 AGGCAATCATCGGTGCGGGTGCTTACTCCTTATCGGCTAGAGCAGTTGAA 650
|.||..||.||.||||||||||||.|.||.|||||.||..||||..|.||
RBAM_003480__ 601 AAGCGGTCTTCCGTGCGGGTGCTTGCGCCGTATCGTCTGAAGCATCTCAA 650
BSNT_00576___ 651 CGG----GGATAAAGAGGGCATCAAAAGCGTGACCGTTTGTCATACTGAG 696
||| || |||..|.|||.|.|||||.|||.||||.||.||||||
RBAM_003480__ 651 CGGCACCGG----AGAACGGATCGAGAGCGTCACCATTTGCCAAACTGAG 696
BSNT_00576___ 697 TCTAGCCAGA----GGGAAGATATAGAGGTTGATGAGCTGATCATTAATC 742
| ||.|| ..||||..||..||.||||||||||..|.||.||.|
RBAM_003480__ 697 T----CCGGACTTTCTGAAGTCATCAAGCTTGATGAGCTCGTTATCAACC 742
BSNT_00576___ 743 ATGGTTTCAAAATTGATCTGGGGCCGATGATGGAGTGGGGGCTGGAGATT 792
|.||.||.|||||||||||.||.|||||||.|||.||||||||.|||||.
RBAM_003480__ 743 ACGGGTTTAAAATTGATCTCGGTCCGATGAAGGACTGGGGGCTTGAGATA 792
BSNT_00576___ 793 GAAGGAGGAAGGGTGAAAGCTGACAGACATATGCGAACGAATCTTCCGGG 842
||||.|||.|||.|.||||||||||||||||||||.||||||||||||||
RBAM_003480__ 793 GAAGAAGGCAGGATTAAAGCTGACAGACATATGCGGACGAATCTTCCGGG 842
BSNT_00576___ 843 CGTGTTTGTGGCGGGCGACGCGGCTTTTTATGAAAGCAAGCTGAGATTAA 892
|||||||||.||.||.|||||.||...|||||||||||||||.|||||.|
RBAM_003480__ 843 CGTGTTTGTCGCCGGTGACGCCGCCCATTATGAAAGCAAGCTCAGATTGA 892
BSNT_00576___ 893 TTGCCGGCGGCTTTACCGAAGGCCCGACAGCAGTCAACAGCGCTAAGGCT 942
||||.|||||.||.||.||.||.|||||.||.||.||||||||.||.||.
RBAM_003480__ 893 TTGCAGGCGGTTTCACGGAGGGGCCGACCGCCGTGAACAGCGCCAAAGCC 942
BSNT_00576___ 943 TATTTGGATCCTAAGGCTGAGAATATGGCGATGTATTCAACCCATCATAA 992
||||||||.||..||||.||..|.||||||||||||||.||.||.|||||
RBAM_003480__ 943 TATTTGGACCCGCAGGCGGATCAGATGGCGATGTATTCGACTCACCATAA 992
BSNT_00576___ 993 AAAATTGGT-ACATAAATAA 1011
||||||||| ||| .|||||
RBAM_003480__ 993 AAAATTGGTGACA-CAATAA 1011
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.