Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00580 and RBAM_003500

See Amino acid alignment / Visit BSNT_00580 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:19
# Commandline: needle
#    -asequence dna-align/BSNT_00580___nasE.1.9828.seq
#    -bsequence dna-align/RBAM_003500___nasE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00580___nasE-RBAM_003500___nasE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00580___nasE-RBAM_003500___nasE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00580___nasE
# 2: RBAM_003500___nasE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     263/321 (81.9%)
# Similarity:   263/321 (81.9%)
# Gaps:           0/321 ( 0.0%)
# Score: 1083.0
# 
#
#=======================================

BSNT_00580___      1 ATGGTAAACAAAGACGTAACAAAAGTATGTATCGGAAAAATTGAAGAATT     50
                     |||||.||.|||||..|.|||||.||.||.||.||.|||.|..|.|||||
RBAM_003500__      1 ATGGTGAATAAAGATATGACAAAGGTTTGCATAGGCAAAGTAAACGAATT     50

BSNT_00580___     51 GCCTGAACAATTAGGCAAAACAGTGTATATTGAAGATAAGGAGCTCGCGG    100
                     .||.||..|.|||||.|||||.||.|||||.||||||||.|||||.||.|
RBAM_003500__     51 ACCCGAGGAGTTAGGAAAAACCGTATATATAGAAGATAAAGAGCTTGCCG    100

BSNT_00580___    101 TTTTCAAGCTTTCAGACGGAAGCATCCGCGCCATCGAAAACCGCTGTCCG    150
                     |.||.||||||||.|||||.|||.||||||||.|||||||.||||||||.
RBAM_003500__    101 TATTTAAGCTTTCTGACGGGAGCGTCCGCGCCGTCGAAAATCGCTGTCCC    150

BSNT_00580___    151 CATAAGGGCGGCGTCCTGGCAGAAGGCATCGTCAGCGGTGAATATGTTTT    200
                     |||||.||.|||||||||||.|||||||||||||||||.||||||||.||
RBAM_003500__    151 CATAAAGGGGGCGTCCTGGCTGAAGGCATCGTCAGCGGAGAATATGTCTT    200

BSNT_00580___    201 CTGCCCGATGCACGACTGGAAAATTTCCTTAGAAGACGGAATCGTCCAAG    250
                     ||||||.|||||.|||||||||||.||||||||||||||||..|||||||
RBAM_003500__    201 CTGCCCAATGCATGACTGGAAAATCTCCTTAGAAGACGGAAAAGTCCAAG    250

BSNT_00580___    251 AACCTGACCACGGATGTGTCAAAACATATGAAACGCTGATCGAAGGAGAA    300
                     |.||.||.||.||.||||||||||||||.|||||.|||||.||||||||.
RBAM_003500__    251 AGCCGGATCATGGCTGTGTCAAAACATACGAAACACTGATTGAAGGAGAG    300

BSNT_00580___    301 CATGTTTATCTCGTATATTGA    321
                     .||||.||.|||.|.||||||
RBAM_003500__    301 AATGTATACCTCCTGTATTGA    321


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