Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00615 and RBAM_003630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence dna-align/BSNT_00615___hxlA.1.9828.seq
# -bsequence dna-align/RBAM_003630___hxlA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00615___hxlA-RBAM_003630___hxlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00615___hxlA-RBAM_003630___hxlA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00615___hxlA
# 2: RBAM_003630___hxlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 640
# Identity: 497/640 (77.7%)
# Similarity: 497/640 (77.7%)
# Gaps: 11/640 ( 1.7%)
# Score: 1915.0
#
#
#=======================================
BSNT_00615___ 1 ATGGAATTACAGCTTGCATTAGACCTCGTCAACATCCCGGAAGCCATTGA 50
.|||||||||||||.|||||||||.|.||.||.|||||||||||.|||||
RBAM_003630__ 1 GTGGAATTACAGCTGGCATTAGACTTAGTGAATATCCCGGAAGCAATTGA 50
BSNT_00615___ 51 GCTCGTCAAAGAGGTAGAACAATACATCGACGTAGTTGAAATCGGAACAC 100
|||.||.||||||||.||||.|||.||.||.||.||.||||||||.||.|
RBAM_003630__ 51 GCTTGTGAAAGAGGTCGAACCATATATAGATGTTGTAGAAATCGGCACTC 100
BSNT_00615___ 101 CGGTCGTCATCAATGAAGGCCTAAGAGCCGTTAAAGAAATAAAAGAAGCA 150
|.||.|||||.|||||||||||.|.||||||..|.|||||.|||..|||.
RBAM_003630__ 101 CCGTTGTCATTAATGAAGGCCTGAAAGCCGTACAGGAAATGAAATCAGCC 150
BSNT_00615___ 151 TTTCCTCAATTGAAGGTTCTTGCAGACCTGAAAATCATGGATGCCGGAGG 200
||||||||.|||||.||.|||||.||.||.||||||||||||||.||.||
RBAM_003630__ 151 TTTCCTCACTTGAAAGTGCTTGCCGATCTTAAAATCATGGATGCAGGCGG 200
BSNT_00615___ 201 CTACGAAATTATGAAAGCGTCGGAAGCAGGCGCTGACATCATCATCGTTT 250
||||||.||.|||||||||.|.|||||.||.||.||||||||||.|||||
RBAM_003630__ 201 CTACGAGATCATGAAAGCGGCAGAAGCGGGAGCCGACATCATCACCGTTT 250
BSNT_00615___ 251 TAGGGGCTACAGACGATGCAACGATTAAAGGCGCAGTAGAAGAAGCCAAA 300
||||.||.||||||||..|||||||.|||||.||.||.|..|||||.|||
RBAM_003630__ 251 TAGGAGCGACAGACGACTCAACGATCAAAGGGGCGGTTGCCGAAGCAAAA 300
BSNT_00615___ 301 AAACAAAAGAAGAAAATCTTAGTGGACATGATTAACGTGAAGGATATCGA 350
|||||..||||.|||||..|.||.||||||||||||||.||..|..|.||
RBAM_003630__ 301 AAACAGCAGAAAAAAATTCTCGTCGACATGATTAACGTAAAAAACCTTGA 350
BSNT_00615___ 351 ATCCCGTGCGAAAGAAATTGACGCA-CTCGGTGTTGACTACATCTGCGTC 399
|.|.||.||.|||||||||||| || |||||||||||.||.||.||.||.
RBAM_003630__ 351 AACACGGGCAAAAGAAATTGAC-CAGCTCGGTGTTGATTATATTTGTGTT 399
BSNT_00615___ 400 CACACTGGCTATGATCTTCAAGCAGAGGGCAAAAACTCTTTCGAAGAATT 449
|||||.||.|||||||||||||||||.||.|||||.||.|||||.|||.|
RBAM_003630__ 400 CACACAGGTTATGATCTTCAAGCAGAAGGAAAAAATTCATTCGAGGAACT 449
BSNT_00615___ 450 AACGACAATCAAAAATACCGTAAAAAACGCAAAAACCGCAATCGCGGGCG 499
.|||.|.||.|||||..|.||.||.|.|||.|||||||||||.||.||.|
RBAM_003630__ 450 GACGGCGATTAAAAAAGCGGTCAAGAGCGCTAAAACCGCAATTGCCGGAG 499
BSNT_00615___ 500 GCATCAAACTTGATACACTGCCAGAAGTGATCAAGCAAAACCCTGACCTT 549
||||.|||||||||||.||.||.||||..|||||.||||||||.||..|.
RBAM_003630__ 500 GCATTAAACTTGATACGCTTCCTGAAGCCATCAAACAAAACCCAGATTTA 549
BSNT_00615___ 550 GTCATTGTTGGGGGCGGAATTACAAGCGCAGCTG---ATAAGGCGGAAAC 596
.|||||||.||.||.||.||||| .|.||||| ||||.|||||..|
RBAM_003630__ 550 ATCATTGTCGGCGGAGGCATTAC---GGGAGCTGACAATAAAGCGGATGC 596
BSNT_00615___ 597 AGCTTCAAAAATGAAGCAGCTGATTGTCCAAGGATAA--- 633
.|||.|.|||||.||.||||||||....|||||||.|
RBAM_003630__ 597 TGCTGCTAAAATAAAACAGCTGATCACACAAGGATCATGA 636
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