Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00640 and RBAM_003770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence dna-align/BSNT_00640___yckJ.1.9828.seq
# -bsequence dna-align/RBAM_003770___yckJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00640___yckJ-RBAM_003770___yckJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00640___yckJ-RBAM_003770___yckJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00640___yckJ
# 2: RBAM_003770___yckJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 708
# Identity: 595/708 (84.0%)
# Similarity: 595/708 (84.0%)
# Gaps: 21/708 ( 3.0%)
# Score: 2585.0
#
#
#=======================================
BSNT_00640___ 1 ATGTTTCTAAATAATCTGCCGG---CATTGACGCTTGGCACGGCGATCCC 47
.|||||| |..||| |||..||.||.||.||
RBAM_003770__ 1 ---------------ATGCCGGAACCCGTGA---TTGCAACAGCCATTCC 32
BSNT_00640___ 48 GTGGGATCTGGTGCAGCAGTCATTCTGGCCGATACTTTCAGGGGGAATCT 97
.||||||||||||||||||||||||||||||||.|||||.||||||||||
RBAM_003770__ 33 TTGGGATCTGGTGCAGCAGTCATTCTGGCCGATTCTTTCCGGGGGAATCT 82
BSNT_00640___ 98 ACTATACGATTCCCCTTACGATTCTTTCCTTTATATTCGGAATGATCCTG 147
|.||..|||||||||||||.||||||||||||||.||||||||||||.|.
RBAM_003770__ 83 ATTACTCGATTCCCCTTACCATTCTTTCCTTTATTTTCGGAATGATCATC 132
BSNT_00640___ 148 GCGCTGATTACGGCGCTTGCCAGAATGTCGAAAGTGAGACCTTTGAGATG 197
|||||||||||||||||.|||||||||||.||..|||.|||.||||||||
RBAM_003770__ 133 GCGCTGATTACGGCGCTCGCCAGAATGTCAAATATGAAACCATTGAGATG 182
BSNT_00640___ 198 GGTGTTCAGCGTATACGTATCCGCAATACGCGGCACTCCTCTTCTCGTTC 247
|||||||||||||||||||||.||..|.||||||||||||||||||||||
RBAM_003770__ 183 GGTGTTCAGCGTATACGTATCAGCGGTGCGCGGCACTCCTCTTCTCGTTC 232
BSNT_00640___ 248 AATTGTTCATCATTTTCTATCTGTTCCCGGCCTTTAACGTCACATTAGAT 297
||||||||||||||||.||||||||||||.|.|||||..|.||..|.||.
RBAM_003770__ 233 AATTGTTCATCATTTTTTATCTGTTCCCGACATTTAATATTACGCTGGAC 282
BSNT_00640___ 298 CCATTTCCAAGCGCAGTTATCGCCTTTTCATTAAACGTCGGCGCCTATGC 347
||.||.|||||||||||.|||||.||||||||||||||.||||||||.||
RBAM_003770__ 283 CCTTTCCCAAGCGCAGTCATCGCGTTTTCATTAAACGTGGGCGCCTACGC 332
BSNT_00640___ 348 ATCTGAAATCATTCGGGCATCTATTTTATCCGTGCCGAAAGGGCAATGGG 397
.|||||||||||.|||||||||||||.|||||||||||||||||||||||
RBAM_003770__ 333 TTCTGAAATCATCCGGGCATCTATTTCATCCGTGCCGAAAGGGCAATGGG 382
BSNT_00640___ 398 AAGCCGGCTACACAATTGGCATGACACATCAAAAAACGCTGTTCCGCGTC 447
|||||||.||.||.||.||||||||..|||..||.||..||||||||||.
RBAM_003770__ 383 AAGCCGGTTATACGATCGGCATGACCTATCGCAAGACATTGTTCCGCGTG 432
BSNT_00640___ 448 ATTTTGCCGCAGGCGTTTCGTGTGTCGATCCCGCCATTATCCAATACCTT 497
||..||||||||||||||||.|||||.||.|||||||||||.|||||.||
RBAM_003770__ 433 ATCCTGCCGCAGGCGTTTCGCGTGTCCATTCCGCCATTATCAAATACATT 482
BSNT_00640___ 498 TATCAGCCTGATTAAAGATACATCCCTCGCCTCTCAAATTCTGGTCGCTG 547
||||||||||||.||.||||||||.|||||.||.||.|||||.|||||.|
RBAM_003770__ 483 TATCAGCCTGATCAAGGATACATCTCTCGCGTCACAGATTCTCGTCGCGG 532
BSNT_00640___ 548 AGCTGTTCAGAAAAGCCCAGGAAATCGGCGCGCGGAATCTTGATCAAATT 597
||||||||||||||||.||||||||||||||||..||.|||||||||||.
RBAM_003770__ 533 AGCTGTTCAGAAAAGCGCAGGAAATCGGCGCGCAAAACCTTGATCAAATC 582
BSNT_00640___ 598 TTAGTGATCTATATTGAAGCAGCCTTTATTTATTGGATTATCTGCTTCCT 647
||.||.||||||||||||||.|||||||||||||||||.|||||||||.|
RBAM_003770__ 583 TTGGTCATCTATATTGAAGCCGCCTTTATTTATTGGATCATCTGCTTCTT 632
BSNT_00640___ 648 GCTTTCACTCGTCCAGCATGTCATCGAACGGCGTCTTGACCGCTACGTGG 697
|||.|||.||||.|||||.||.||||||||||||||.|||||.||.||||
RBAM_003770__ 633 GCTGTCAATCGTACAGCACGTGATCGAACGGCGTCTCGACCGTTATGTGG 682
BSNT_00640___ 698 CCAAATAA 705
||||||||
RBAM_003770__ 683 CCAAATAA 690
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