Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00647 and RBAM_003810
See
Amino acid alignment /
Visit
BSNT_00647 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence dna-align/BSNT_00647___yclC.1.9828.seq
# -bsequence dna-align/RBAM_003810___yclC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00647___yclC-RBAM_003810___yclC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00647___yclC-RBAM_003810___yclC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00647___yclC
# 2: RBAM_003810___yclC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1424
# Identity: 1203/1424 (84.5%)
# Similarity: 1203/1424 (84.5%)
# Gaps: 4/1424 ( 0.3%)
# Score: 5107.0
#
#
#=======================================
BSNT_00647___ 1 ATGGCTTATCAAGATTTCAGAGAATTTCTCGCTGCCCTTGAAAAAGAAGG 50
|||||.|||||.|||||.||.|||||||||||.||.||||||||||||||
RBAM_003810__ 1 ATGGCCTATCAGGATTTTAGGGAATTTCTCGCCGCTCTTGAAAAAGAAGG 50
BSNT_00647___ 51 ACAGCTGCTT-ACAGTGAATGAAGAGGTAAAGCCGGAACCGGATTTAGGG 99
.||||| ||| |||||.||.||||||||.||.|||||.||||||.|.||.
RBAM_003810__ 51 GCAGCT-CTTAACAGTCAACGAAGAGGTGAAACCGGAGCCGGATCTGGGT 99
BSNT_00647___ 100 GCCGCCGCACGGGCAGCCAGCAATCTTGGCGATAAAAGCCCCGCGCTCTT 149
||||||||.||.||||||||||||||.||.|||||||.|||.|||||.||
RBAM_003810__ 100 GCCGCCGCGCGTGCAGCCAGCAATCTCGGGGATAAAACCCCTGCGCTTTT 149
BSNT_00647___ 150 ATTTAACAACATTTACGGCTATCATAACGCCCAAATTGCGATGAATGTCA 199
|||||||||.||||||||..||||..|.||.||..|.||..|||||||||
RBAM_003810__ 150 ATTTAACAATATTTACGGACATCACCATGCGCAGGTGGCTCTGAATGTCA 199
BSNT_00647___ 200 TCGGCTCTTGGCCAAACCATGCCATGATGCTGGGCATGCCGAAAGACACA 249
|||||||.|||||.||.||.||.||||||||.||||||||||||||.||.
RBAM_003810__ 200 TCGGCTCGTGGCCGAATCACGCGATGATGCTCGGCATGCCGAAAGATACG 249
BSNT_00647___ 250 CCGGTAAAAGAACAGTTTTTTGAATTCGCAAAGCGTTATGA-CCAGTTTC 298
||.||.||||||||.||.|||||.|||||.||.||.||.|| .|| ||||
RBAM_003810__ 250 CCTGTTAAAGAACAATTCTTTGAGTTCGCCAAACGGTACGATGCA-TTTC 298
BSNT_00647___ 299 CGATGCCGGTCAAACGTGAGGAAACAGCACCATTTCATGAAAATGAAATC 348
||.|||||||||||||.||.|||||.||.||.|||||||||||||||||.
RBAM_003810__ 299 CGGTGCCGGTCAAACGGGAAGAAACCGCGCCGTTTCATGAAAATGAAATA 348
BSNT_00647___ 349 ACAGAAGATATCAATTTGTTCGATATACTGCCTCTTTTCAGAATTAACCA 398
||.||||||||||||.|.||.||.||.||.||.||.||||||||.|||||
RBAM_003810__ 349 ACGGAAGATATCAATCTATTTGACATCCTTCCGCTATTCAGAATCAACCA 398
BSNT_00647___ 399 AGGTGATGGAGGCTACTATTTAGACAAAGCGTGTGTCATCTCCCGTGATC 448
.||.||.||.|||||||||||.||.||||||||||||||.|||||.||||
RBAM_003810__ 399 GGGGGACGGCGGCTACTATTTGGATAAAGCGTGTGTCATTTCCCGCGATC 448
BSNT_00647___ 449 TTGAAGACCCTGACAACTTCGGCAAACAAAATGTCGGCATTTACAGAATG 498
|||||||.||.|||||.||||||||.||.|||||||||||||||||||||
RBAM_003810__ 449 TTGAAGATCCGGACAATTTCGGCAAGCAGAATGTCGGCATTTACAGAATG 498
BSNT_00647___ 499 CAGGTCAAAGGAAAAGACCGCCTCGGCATTCAGCCTGTCCCGCAGCACGA 548
|||||.||.||||||||||||||||||||||||||.||.||.|||||.||
RBAM_003810__ 499 CAGGTAAAGGGAAAAGACCGCCTCGGCATTCAGCCCGTGCCTCAGCATGA 548
BSNT_00647___ 549 TATTGCAATCCATCTGCGCCAAGCTGAAGAACGCGGCATCAATCTTCCGG 598
||||||.||.|||||.|||||||||||||||||||||.|.||||||||.|
RBAM_003810__ 549 TATTGCGATTCATCTTCGCCAAGCTGAAGAACGCGGCGTGAATCTTCCCG 598
BSNT_00647___ 599 TCACCATTGCGCTCGGCTGTGAGCCGGTCATTACAACGGCGGCATCGACT 648
|.||.||.||||||||||||||||||||.|||||.||.||.||.||.|||
RBAM_003810__ 599 TTACGATCGCGCTCGGCTGTGAGCCGGTGATTACGACAGCTGCGTCAACT 648
BSNT_00647___ 649 CCGCTTCTCTATGATCAATCAGAATACGAAATGGCAGGCGCGATTCAAGG 698
|||||..|.||.||||||||.||.||.||||||||.||||||||||||||
RBAM_003810__ 649 CCGCTGTTATACGATCAATCCGAGTATGAAATGGCCGGCGCGATTCAAGG 698
BSNT_00647___ 699 CGAACCATATCGCATCGTCAAATCAAAGCTGTCTGATCTTGATGTTCCTT 748
.||.||.||..|.|||||||||||.||..||||||||.|.||..|.||||
RBAM_003810__ 699 GGAGCCCTACAGAATCGTCAAATCTAAATTGTCTGATTTAGACATCCCTT 748
BSNT_00647___ 749 GGGGTGCTGAAGTGGTGCTTGAAGGTGAGATTATTGCCGGAGAGCGCGAA 798
||||.||||||||.||.||.|||||.|||||..||||.|||||.||.|||
RBAM_003810__ 749 GGGGCGCTGAAGTCGTTCTGGAAGGAGAGATCCTTGCGGGAGAACGGGAA 798
BSNT_00647___ 799 TATGAAGGGCCGTTCGGTGAATTCACAGGCCATTATTCCGGCGGACGCAG 848
||.|||||.||.||||||||.||.||.|||||||||||.|||||.|||||
RBAM_003810__ 799 TACGAAGGACCTTTCGGTGAGTTTACGGGCCATTATTCAGGCGGCCGCAG 848
BSNT_00647___ 849 CATGCCGATTATCAAAATTAAACGCGTCTATCACAGAAACAATCCGATCT 898
|||||||.|.||||||||.|||||.||.|||||.||||||||||||||.|
RBAM_003810__ 849 CATGCCGGTGATCAAAATCAAACGGGTATATCATAGAAACAATCCGATTT 898
BSNT_00647___ 899 TTGAACATTTATACTTAGGCATGCCTTGGACAGAATGCGATTACATGATT 948
|||||||||||||||||||||||||.|||||.||.||||||||.|||||.
RBAM_003810__ 899 TTGAACATTTATACTTAGGCATGCCGTGGACGGAGTGCGATTATATGATC 948
BSNT_00647___ 949 GGCATTAACACATGCGTGCCGCTTTATCAGCAGTTAAAAGAAGCGTACCC 998
||||||||.||.||||||||||||||.||||||.|.||.|||||.||.||
RBAM_003810__ 949 GGCATTAATACGTGCGTGCCGCTTTACCAGCAGCTCAAGGAAGCTTATCC 998
BSNT_00647___ 999 GAACGAAATTGTGGCAGTGAACGCCATGTACACACACGGTTTAATCGCGA 1048
||||||||||||.||.||||||||.|||||.||.|||||..|.|||||.|
RBAM_003810__ 999 GAACGAAATTGTCGCCGTGAACGCGATGTATACGCACGGGCTGATCGCCA 1048
BSNT_00647___ 1049 TTGTTTCCACAAAAACCCGCTATGGCGGATTTGCGAAAGCGGTCGGCATG 1098
||.|||||||.|||||.|||||.|||||||||||.||.||||||||||||
RBAM_003810__ 1049 TTATTTCCACGAAAACGCGCTACGGCGGATTTGCCAAGGCGGTCGGCATG 1098
BSNT_00647___ 1099 CGCGCACTCACAACGCCGCACGGACTCGGCTACTGCAAAATGGTCATTGT 1148
|||||.||.||.||||||||||||||||||||||||||||||||||||||
RBAM_003810__ 1099 CGCGCCCTGACGACGCCGCACGGACTCGGCTACTGCAAAATGGTCATTGT 1148
BSNT_00647___ 1149 CGTTGATGAGGATGTCGATCCATTCAACCTTCCGCAGGTCATGTGGGCGC 1198
.||.|||||||||||||||||.||.|||||.|||||.|||||||||||||
RBAM_003810__ 1149 TGTGGATGAGGATGTCGATCCGTTTAACCTGCCGCAAGTCATGTGGGCGC 1198
BSNT_00647___ 1199 TTTCGACCAAAATGCATCCGAAACACGATGCGGTCATCATTCCGGACTTA 1248
|.||.||.|||||||||||.|||||||||||.|||||||||||.||..|.
RBAM_003810__ 1199 TCTCAACGAAAATGCATCCAAAACACGATGCAGTCATCATTCCTGATCTG 1248
BSNT_00647___ 1249 TCTGTCCTGCCGCTTGATCCGGGATCCAATCCATCAGGAATCACTCACAA 1298
||.|||||.||||||||.|||||.||..||||..||||.||.||.|||||
RBAM_003810__ 1249 TCCGTCCTTCCGCTTGACCCGGGGTCTGATCCGGCAGGGATGACACACAA 1298
BSNT_00647___ 1299 AATGATTCTCGACGCCACTACACCGGTTGCGCCGGAAACAAGAGGCCATT 1348
|||||||||.||||||||.||.||.||.||||||||||||||||||||||
RBAM_003810__ 1299 AATGATTCTTGACGCCACAACGCCTGTCGCGCCGGAAACAAGAGGCCATT 1348
BSNT_00647___ 1349 ATTCACAGCCGCTTGATTCTCCGCTAACAACGAAAGAATGGGAACAAAAA 1398
||||.||||||||||||||||||||.||||||||||||||||||||||||
RBAM_003810__ 1349 ATTCTCAGCCGCTTGATTCTCCGCTGACAACGAAAGAATGGGAACAAAAA 1398
BSNT_00647___ 1399 CTAATGGATTTAATGAATAAATAA 1422
||.|||||.|||||||||.|||||
RBAM_003810__ 1399 CTGATGGACTTAATGAATCAATAA 1422
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.