Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06060 and RBAM_003920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:33
# Commandline: needle
# -asequence dna-align/BSNT_06060___yxeM.1.9828.seq
# -bsequence dna-align/RBAM_003920___yxeM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06060___yxeM-RBAM_003920___yxeM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06060___yxeM-RBAM_003920___yxeM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06060___yxeM
# 2: RBAM_003920___yxeM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 798
# Identity: 638/798 (79.9%)
# Similarity: 638/798 (79.9%)
# Gaps: 9/798 ( 1.1%)
# Score: 2524.5
#
#
#=======================================
BSNT_06060___ 1 ATGAAGATGAAAAAATGGACAGTGCTG--GTCGTTGCTGCATTATTAGCG 48
|||||||.|||||.||||.|..||||| ||| |||.||..|.||.|||
RBAM_003920__ 1 ATGAAGAAGAAAACATGGGCTTTGCTGCTGTC--TGCCGCGCTTTTGGCG 48
BSNT_06060___ 49 GTGCTCTCAGCTTGCGGCAATGGAAACAGCAGCAGTAAAGAGGATGACAA 98
||..|.|||||.|||||.||.||||| ||.| ||..|||..|..||.||
RBAM_003920__ 49 GTCTTATCAGCATGCGGAAACGGAAA-AGAA--AGCGAAGGCGGCGATAA 95
BSNT_06060___ 99 TGTGCTTCATGTCGGTGCGACAGGACAAAGTTACCCATTTGCATATAAAG 148
.||.||.||||||||.||.||.||||||||.||.||.||.||||||||||
RBAM_003920__ 96 CGTACTGCATGTCGGCGCCACGGGACAAAGCTATCCGTTCGCATATAAAG 145
BSNT_06060___ 149 AAAACGGAAAGCTGACAGGCTTTGATGTGGAAGTGATGGAAGCGGTCGCT 198
|||||||.||||||||.||||||||.|||||.||.||||||||.||.||.
RBAM_003920__ 146 AAAACGGCAAGCTGACCGGCTTTGACGTGGATGTCATGGAAGCCGTTGCA 195
BSNT_06060___ 199 AAGAAAATTGACATGAAACTGGACTGGAAGCTGCTTGAATTCAGCGGGCT 248
||.|||||..|||||||||||||||||||||||||||||||||||||.||
RBAM_003920__ 196 AAAAAAATCAACATGAAACTGGACTGGAAGCTGCTTGAATTCAGCGGACT 245
BSNT_06060___ 249 GATGGGAGAGCTTCAAACAGGCAAGCTTGACACCATTTCCAACCAGGTAG 298
||||||||||||.||.||.|||||.||.||||||||.||.||||||||.|
RBAM_003920__ 246 GATGGGAGAGCTCCAGACCGGCAAACTCGACACCATCTCTAACCAGGTCG 295
BSNT_06060___ 299 CTGTGACAGACGAACGTAAGGAAACGTATAACTTTACGAAACCATACGCT 348
||||.||.||||||||.|||.|||||||||||||.||..||||.||..|.
RBAM_003920__ 296 CTGTCACGGACGAACGCAAGAAAACGTATAACTTCACAGAACCGTATTCG 345
BSNT_06060___ 349 TATGCGGGAACACAGATTGTCGTCAAAAAAGACAATACTGATATCAAATC 398
||||||||.||.||.||.|||||||||||.||.||.|..||.||||||||
RBAM_003920__ 346 TATGCGGGCACTCAAATCGTCGTCAAAAACGATAACAAAGACATCAAATC 395
BSNT_06060___ 399 AGTAGACGATTTGAAAGGCAAGACAGTCGCAGCCGTTCTCGGTTCAAACC 448
|||..|||||.|.|||||.||.|||||.||.||||||||.||.|||||||
RBAM_003920__ 396 AGTCAACGATCTAAAAGGAAAAACAGTGGCGGCCGTTCTGGGCTCAAACC 445
BSNT_06060___ 449 ACGCGAAAAACCTTGAAAGCAAAGATCCTGATAAAAAAATCAATATCAAA 498
||||||||||||||||.|||||.||.||.||||||||||||||.||.|||
RBAM_003920__ 446 ACGCGAAAAACCTTGAGAGCAAGGACCCGGATAAAAAAATCAACATGAAA 495
BSNT_06060___ 499 ACGTACGAAACACAAGAGGGTACGCTGAAGGATGTTGCGTACGGCCGTGT 548
|||||.|||||||||||.||.||||||||.||.||.||.|||||.||.||
RBAM_003920__ 496 ACGTATGAAACACAAGAAGGCACGCTGAAAGACGTGGCTTACGGACGGGT 545
BSNT_06060___ 549 AGACGCTTATGTCAACAGCCGAACTGTATTGATCGCGCAAATCAAGAAGA 598
.|||||||||||.||||||||.|..||..|||||||.||.|||||.||||
RBAM_003920__ 546 TGACGCTTATGTAAACAGCCGCAGCGTCCTGATCGCCCAGATCAAAAAGA 595
BSNT_06060___ 599 CCGGTTTGCCATTAAAGCTTGCAGGAGATCCGATTGTTTACGAACAGGTT 648
|||||.||||..|.||..|.||||||||.||||||||.||.|||.|.||.
RBAM_003920__ 596 CCGGTCTGCCTCTGAAATTAGCAGGAGACCCGATTGTCTATGAAAAAGTC 645
BSNT_06060___ 649 GCATTCCCATTTGCCAAGGACGATGCGCACGACAAGCTCCGCAAAAAAGT 698
||.|||||.|||||.||.||.|..||.|||||.||..|||||||||||||
RBAM_003920__ 646 GCTTTCCCGTTTGCGAAAGATGCGGCTCACGATAAAATCCGCAAAAAAGT 695
BSNT_06060___ 699 CAATAAGGCCCTAGATGAATTGCGTAAAGACGGAACACTGAAAAAACTCT 748
.||.||.|||.|.||.||..||||.||||||||.||.||||||||.||.|
RBAM_003920__ 696 AAACAAAGCCATTGAAGACCTGCGGAAAGACGGCACGCTGAAAAAGCTGT 745
BSNT_06060___ 749 CTGAAAAATACTTTAATGAAGATATCACAGTAGAA-CAGAAGCATTAA 795
|||||||.||||||||.||||||||||||..|||| || |||||||||
RBAM_003920__ 746 CTGAAAAGTACTTTAAAGAAGATATCACAACAGAAGCA-AAGCATTAA 792
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