Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00690 and RBAM_004180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence dna-align/BSNT_00690___gdh.1.9828.seq
# -bsequence dna-align/RBAM_004180___gdh.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00690___gdh-RBAM_004180___gdh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00690___gdh-RBAM_004180___gdh.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00690___gdh
# 2: RBAM_004180___gdh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 791
# Identity: 630/791 (79.6%)
# Similarity: 630/791 (79.6%)
# Gaps: 10/791 ( 1.3%)
# Score: 2484.0
#
#
#=======================================
BSNT_00690___ 1 ATGTATCCGGACTTAAAAGGAAAAGTCGTCGCTATTACAGGAGCTGCTTC 50
|||||..||||.|||||||||||||||||.||.|||||.||||||.|.||
RBAM_004180__ 1 ATGTACACGGATTTAAAAGGAAAAGTCGTTGCCATTACGGGAGCTTCATC 50
BSNT_00690___ 51 AGGGCTCGGAAAGGCAATGGCCATTCGCTTCGGCAAGGAGCAGGCAAAAG 100
|||..|.|||||.||.|||||.||.||||||||..||||||||||.||||
RBAM_004180__ 51 AGGATTAGGAAAAGCGATGGCGATCCGCTTCGGACAGGAGCAGGCGAAAG 100
BSNT_00690___ 101 TGGTTATCAACTATTATAGTAATAAACAAGA--TCCGAACGAGGTAAAAG 148
|.||..|.|||||.|||||||||.||.|||| .||.||| .||.||||
RBAM_004180__ 101 TCGTGGTTAACTACTATAGTAATGAAAAAGACGCCCAAAC--CGTTAAAG 148
BSNT_00690___ 149 AAGAGGTCATC--AAGGCGGGCGGTGAAGCTGTTGTCGTCCAAGGAGATG 196
|||||.| || ||.|||||.||.|||||.||..||||.|||||.||.|
RBAM_004180__ 149 AAGAGAT--TCAAAAAGCGGGAGGCGAAGCGGTCATCGTTCAAGGCGACG 196
BSNT_00690___ 197 TCACGAAAGAGGAAGATGTAAAAAATATCGTGCAAACGGCAATTAAAGAG 246
||||.|||||.||||||||.|||||.||||||||.||.||..|.||.||.
RBAM_004180__ 197 TCACAAAAGAAGAAGATGTCAAAAACATCGTGCAGACCGCGGTGAAGGAA 246
BSNT_00690___ 247 TTCGGCACACTCGATATTATGATTAATAATGCCGGTCTTGAAAATCCTGT 296
|||||.|||.|.|||.|.|||||.|||||.|||||..|.||||||||.||
RBAM_004180__ 247 TTCGGGACATTGGATGTCATGATCAATAACGCCGGCATGGAAAATCCGGT 296
BSNT_00690___ 297 GCCATCTCACGAAATGCCGCTTAAGGATTGGGATAAAGTCATCGGCACAA 346
.|..||.||.||||||||||||||.||.|||.|.|||||||||...||.|
RBAM_004180__ 297 TCAGTCACATGAAATGCCGCTTAAAGACTGGAACAAAGTCATCAATACCA 346
BSNT_00690___ 347 ACTTAACAGGTGCCTTTTTAGGAAGCCGTGAAGCGATTAAATATTTCGTA 396
|..|.||.||.||.||.|||||||||||.|||||.||||||||||.||||
RBAM_004180__ 347 ATCTGACCGGCGCTTTCTTAGGAAGCCGCGAAGCCATTAAATATTACGTA 396
BSNT_00690___ 397 GAAAACGATA-TCAAGGGAAATGTCATCAACATGTCCAGTGTGCACGAAG 445
||.||.|||| |||| |||||.|||||.||||||||.||.||.||.|||.
RBAM_004180__ 397 GAGAATGATATTCAA-GGAAACGTCATTAACATGTCGAGCGTACATGAAA 445
BSNT_00690___ 446 TGATTCCTTGGCCGTTATTTGTTCACTACGCGGCAAGTAAAGGCGGGATA 495
|||||||.||||||.|.|||||||||||||||||.|||||||||||.||.
RBAM_004180__ 446 TGATTCCGTGGCCGCTGTTTGTTCACTACGCGGCGAGTAAAGGCGGCATC 495
BSNT_00690___ 496 AAGCTGATGACAGAAACATTGGCGTTGGAATACGCGCCGAAGGGCATTCG 545
||..|||||||.|||||..|||||.|.||.||||||||||||.||||.||
RBAM_004180__ 496 AAATTGATGACGGAAACGCTGGCGCTTGAGTACGCGCCGAAGCGCATCCG 545
BSNT_00690___ 546 CGTGAACAATATCGGGCCAGGTGCGATCAATACGCCAATCAATGCTGAAA 595
.||.|||||.||||||||.||.||.|||||||||||.|||||.||.||||
RBAM_004180__ 546 TGTTAACAACATCGGGCCGGGAGCCATCAATACGCCGATCAACGCGGAAA 595
BSNT_00690___ 596 AATTTGCTGACCCTAAACAGAAAGCAGATGTAGAAAGCATGATTCCGATG 645
|||||||.||.||....||||||..||||||.||||||||||||||||||
RBAM_004180__ 596 AATTTGCGGATCCCGTTCAGAAAAAAGATGTGGAAAGCATGATTCCGATG 645
BSNT_00690___ 646 GGGTATATCGGCGAACCGGAGGAGATCGCCGCAGTGGCAGTGTGGCTTGC 695
||.||||||||.||.|||||.||.|||||.||.||.||.||.||||||||
RBAM_004180__ 646 GGATATATCGGTGAGCCGGAAGAAATCGCGGCTGTCGCCGTCTGGCTTGC 695
BSNT_00690___ 696 TTCGAAGGAATCCAGCTATGTTACAGGCATCACATTGTTTGCGGACGGCG 745
|||.||||||||.|||||.||.||.|||||.||..|||||||.|||||.|
RBAM_004180__ 696 TTCAAAGGAATCAAGCTACGTAACCGGCATTACGCTGTTTGCTGACGGGG 745
BSNT_00690___ 746 GAATGACGAAATATCCTTCTTTCCAGGCAGGCCGCGGTTAA 786
|||||||.||||||||.||.|||||||||||||||||.|||
RBAM_004180__ 746 GAATGACCAAATATCCGTCATTCCAGGCAGGCCGCGGATAA 786
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