Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00737 and RBAM_004440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence dna-align/BSNT_00737___ydaG.1.9828.seq
# -bsequence dna-align/RBAM_004440___ydaG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00737___ydaG-RBAM_004440___ydaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00737___ydaG-RBAM_004440___ydaG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00737___ydaG
# 2: RBAM_004440___ydaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 424
# Identity: 337/424 (79.5%)
# Similarity: 337/424 (79.5%)
# Gaps: 2/424 ( 0.5%)
# Score: 1325.0
#
#
#=======================================
BSNT_00737___ 1 ATGAATCAGCAAGACATTAAACAAAAAGTGCTTGATGTTCTAGATCACCA 50
||||||||..|.||.||.|||.|||||||||||||.||.||.|||||.||
RBAM_004440__ 1 ATGAATCAAAATGAAATCAAAGAAAAAGTGCTTGAAGTACTGGATCATCA 50
BSNT_00737___ 51 TAAAGTAGGTTCGCTCGCAACAGTTCAAAAGGGCAAACCGAATTCCCGCT 100
||||||.||||||||.||.||.||..|..|.|||||||||.||||.||||
RBAM_004440__ 51 TAAAGTCGGTTCGCTTGCGACGGTAGAGCAAGGCAAACCGCATTCACGCT 100
BSNT_00737___ 101 ACATGACTTTTTTCCATGACGGGCTGACGATTTACACACCGACAAGCAAG 150
|||||||.||||||||||||||..|.|||||||||||.|||||.|||||.
RBAM_004440__ 101 ACATGACATTTTTCCATGACGGCTTAACGATTTACACGCCGACGAGCAAA 150
BSNT_00737___ 151 GAAACTCATAAAGCGGAAGAAATTGAGAACAACCCCAATGTCCACATTTT 200
||.|||||||||||||||||||||||.|||||.||.|||||.||.|||.|
RBAM_004440__ 151 GACACTCATAAAGCGGAAGAAATTGAAAACAATCCGAATGTTCATATTCT 200
BSNT_00737___ 201 ATTAGGCTATGATTGTGAAGGCTTTGGCGACGCATATGTCGAAGTTGCCG 250
.|||||.|||||.||||||||.||.||.|||||.|||||.|||||.||||
RBAM_004440__ 201 GTTAGGGTATGACTGTGAAGGATTCGGAGACGCTTATGTGGAAGTGGCCG 250
BSNT_00737___ 251 GAAAAGCCAAAATCAACAATTCGGCAGAACTCAAGGACAAAATATGGAGT 300
|||..||||||.|.|||||.||.||.||..|.||.||.||..|.||| |.
RBAM_004440__ 251 GAACCGCCAAACTGAACAACTCAGCCGATTTAAAAGAAAAGCTGTGG-GA 299
BSNT_00737___ 301 TCC-AAATTAGAGCGCTGGTTTGACGGCAAGGATGATCCGAATCTGGTGA 349
||| |||.|.||.||||||||||||||.||.||.||||||||.|||||||
RBAM_004440__ 300 TCCGAAACTGGAACGCTGGTTTGACGGAAAAGACGATCCGAACCTGGTGA 349
BSNT_00737___ 350 TTCTTGAAATTGAACCGGAGGATATCAGATTAATGAATGCCGGGGAGAAA 399
|||||||||||||||||.||.|.||||...|.|||||.||.||.||.|||
RBAM_004440__ 350 TTCTTGAAATTGAACCGAAGCAGATCAAGCTCATGAACGCGGGTGAAAAA 399
BSNT_00737___ 400 ACACCGGTCTCACTCGAACTATAA 423
||.||||.|...||.|||||.|||
RBAM_004440__ 400 ACGCCGGCCGAGCTGGAACTTTAA 423
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