Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00751 and RBAM_004660

See Amino acid alignment / Visit BSNT_00751 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence dna-align/BSNT_00751___mntH.1.9828.seq
#    -bsequence dna-align/RBAM_004660___mntH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00751___mntH-RBAM_004660___mntH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00751___mntH-RBAM_004660___mntH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00751___mntH
# 2: RBAM_004660___mntH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1303
# Identity:     963/1303 (73.9%)
# Similarity:   963/1303 (73.9%)
# Gaps:          56/1303 ( 4.3%)
# Score: 3451.5
# 
#
#=======================================

BSNT_00751___      1 ATGAACAAGGACATCACAGCACAATCTCCCCGTTCCAAAGCCGTCCAAGA     50
                     ||||.|||.||||||.||||||||||.|..|...|.||||||||.||.||
RBAM_004660__      1 ATGAGCAAAGACATCTCAGCACAATCACTGCAAGCAAAAGCCGTGCAGGA     50

BSNT_00751___     51 TGCGCTTGACGGGAAAATCAGAGGATTCAGAG-GGCTGCTCCCTTTTCTC     99
                     |||.||||||||.||||.||..||||||| || ||||.||.||||||.|.
RBAM_004660__     51 TGCACTTGACGGCAAAAGCAAGGGATTCA-AGCGGCTTCTGCCTTTTTTA     99

BSNT_00751___    100 GGCCCTGCATTTATAGCAGCCATTGCCTATATTGATCCCGGCAACTTCGC    149
                     |||||.||.|||||.||.||.||||||||.||||||||.||.||||||||
RBAM_004660__    100 GGCCCCGCCTTTATCGCGGCGATTGCCTACATTGATCCGGGAAACTTCGC    149

BSNT_00751___    150 AACGAATATTTCGGCGGGTTCTAAATACGGATATATGCTCTTATGGGTGA    199
                     .||||||||.||.||.|||||.||.||.||.||||||||..|.|||||.|
RBAM_004660__    150 TACGAATATCTCAGCTGGTTCGAAGTATGGGTATATGCTGCTGTGGGTCA    199

BSNT_00751___    200 TCTTATTTTCTAATATCATGGCCCTTTTAATTCAATCCCTATCCGCCAAA    249
                     ||.|.|||||.||..|.|||||..|||||||||||...||.|||||.||.
RBAM_004660__    200 TCCTCTTTTCAAACTTGATGGCTTTTTTAATTCAAGTTCTTTCCGCGAAG    249

BSNT_00751___    250 CTCGGTATTGCGACAGGCAAAAATCTGCCTGAGGTTGCCCGTGA--AGAA    297
                     |||||.|||||.||.||.|||||.||.||.||..|.|||.|.||  .|.|
RBAM_004660__    250 CTCGGCATTGCCACGGGTAAAAACCTTCCGGAAATCGCCAGAGACCGGTA    299

BSNT_00751___    298 TTCCCGAAGCCTGTCTCGATCGGATTATGGATTCAGGGCGAGCTTGTCAT    347
                     |  |||||....||.||...|||..|.|||||.|||||.||.||.||.||
RBAM_004660__    300 T--CCGAAATGGGTATCAGCCGGGCTGTGGATACAGGGTGAACTGGTGAT    347

BSNT_00751___    348 TATCGCAACTGACCTGGCGGAATTTATCGGAGCGGCTCTGGGACTGTATT    397
                     |||.||||||||.|||||.|||||||||||.|||||.||.|||||..|..
RBAM_004660__    348 TATGGCAACTGATCTGGCAGAATTTATCGGGGCGGCGCTCGGACTCAACC    397

BSNT_00751___    398 TGCTGTTCGGCATGCCGATGCTTGAAGCGTCTATTATTGCGGCGATCGGT    447
                     |||||||||||||.||||||.||||||||.|.|||||.|||||||||||.
RBAM_004660__    398 TGCTGTTCGGCATACCGATGGTTGAAGCGGCCATTATCGCGGCGATCGGA    447

BSNT_00751___    448 TCTTTCGCGATATTGGAGCTTCAGCGCCGCGGTTATCGCTCACTTGAAGC    497
                     ||.||||||||.||.|||||.||||||||.|||||.||..|.||.|||||
RBAM_004660__    448 TCATTCGCGATTTTAGAGCTGCAGCGCCGGGGTTACCGGGCGCTGGAAGC    497

BSNT_00751___    498 CGGTATTGCCGGTATGCTGTTTGTGGTCGTGATCGCCTTTGCGCTGCAGA    547
                     .||.||||||||..|.|||||.||.||.|||||||||||.||.|||||.|
RBAM_004660__    498 GGGCATTGCCGGACTTCTGTTCGTCGTGGTGATCGCCTTCGCTCTGCAAA    547

BSNT_00751___    548 CCTTTTTCGCAAAGCCTGATGCCGTGTCAGTGATGAAGGGCCTTTTTGTC    597
                     ||||.||.||.||.|||||.||||..||.||..|..||||.||.|||.||
RBAM_004660__    548 CCTTCTTTGCCAAACCTGACGCCGCCTCCGTTCTCGAGGGGCTGTTTATC    597

BSNT_00751___    598 CCGGCGTTTCATGGCACCGACAGTGTGCTTCTT-GCAGCGGGTATTCTTG    646
                     |||....||.|.||.|..|||||||||| |||| |||.|.||.||.||.|
RBAM_004660__    598 CCGAAAATTGACGGAATGGACAGTGTGC-TCTTGGCAACCGGGATACTCG    646

BSNT_00751___    647 GCGCAACTGTTATGCCGCACGCCATTTATTTACACTCTGCCCTTACACAG    696
                     |||||||.||.||||||||.||||||||.|||||.||.||.||.||||||
RBAM_004660__    647 GCGCAACCGTGATGCCGCATGCCATTTACTTACATTCCGCACTGACACAG    696

BSNT_00751___    697 CGGCGGGTGGTTGGCAAAACTGATGCAGAACGGAAAAAAATCTTTAGGTT    746
                     ||.||.||.||.||.|||||.|||...||.||||||||.||.|||||.||
RBAM_004660__    697 CGCCGTGTCGTCGGAAAAACGGATAGTGAGCGGAAAAAGATTTTTAGATT    746

BSNT_00751___    747 TGAATTTATTGATATTTTAATAGCGATGCTGATTGCAGGGGCTATTAATG    796
                     .||....|||||.|||.|.||.||||||.||||.||.|||||.|||||.|
RBAM_004660__    747 CGAGACGATTGACATTCTCATCGCGATGGTGATCGCCGGGGCGATTAACG    796

BSNT_00751___    797 CAAGTATGCTGATTGTGGCTGCCGCATTATTCTTCAAAAACGGCCTGTTT    846
                     ||||.|||||.||.||.||||||||..|.||||||||.|||||.||||.|
RBAM_004660__    797 CAAGCATGCTCATCGTCGCTGCCGCGCTTTTCTTCAAGAACGGGCTGTAT    846

BSNT_00751___    847 GTTGAGGATCTCGACGTCGCATTTCAGCAATTCGGACATCTTGTCAGTCC    896
                     ||.||.|||.|.|||||.||.|.||||||||||||.||           |
RBAM_004660__    847 GTAGAAGATTTAGACGTGGCTTATCAGCAATTCGGCCA-----------C    885

BSNT_00751___    897 TATGTCTG--CGGCTT---------TATTCGGGATCGGGCTGCTCGTTGC    935
                     |||.||.|  ||||||         |.|||||||||||||||||.|..||
RBAM_004660__    886 TATATCGGACCGGCTTCAGCCGTTCTCTTCGGGATCGGGCTGCTGGCCGC    935

BSNT_00751___    936 CGGTCTATCCAGTTCGTCTGTCGGTACACTTTCAGGCGACGTGATTATGC    985
                     .||.||.||.||.||.||||||||.|||.|.||||||||..|.||.||||
RBAM_004660__    936 AGGGCTTTCAAGCTCTTCTGTCGGCACATTGTCAGGCGATATTATCATGC    985

BSNT_00751___    986 AAGGATTTATCAACTACCGCATTCCGCTGTATGTACGGCGTTTTATCACG   1035
                     |.||.||.|||...|||||.||.|||||.|||.|.||||||||.||.||.
RBAM_004660__    986 AGGGCTTCATCCGTTACCGTATCCCGCTTTATTTGCGGCGTTTCATTACC   1035

BSNT_00751___   1036 ATCATTCCGCCGATCTTGATCATC----GCGTCAGGTGTTAATCCGAC-G   1080
                     |||||||||||||   ||||||||    .| ||.||.||.||..|.|| |
RBAM_004660__   1036 ATCATTCCGCCGA---TGATCATCATTATC-TCGGGGGTCAACGCCACAG   1081

BSNT_00751___   1081 ACCGCTCTCGTACTGAGCCAGGTCGTGCTGTCCTTCGGGATCGCCTTTGC   1130
                     | .||.||||||..||||||||||||.||.||.|||||.|||.|||||||
RBAM_004660__   1082 A-AGCGCTCGTATGGAGCCAGGTCGTTCTTTCATTCGGCATCTCCTTTGC   1130

BSNT_00751___   1131 CCTCATTCCGCTTATTATGTTTACAAGCAATAAACGGATCATGGGATCTC   1180
                     .|||.|.|||||.|||||||||||||||||.|||||..|.|||||..|.|
RBAM_004660__   1131 GCTCGTGCCGCTGATTATGTTTACAAGCAACAAACGCCTGATGGGCGCCC   1180

BSNT_00751___   1181 TGATCAACGCCAAATGGGTCACAGTGGTGTCT----TGGCTGATTGCTGT   1226
                     |||..|||...||||||||.||    |..|||    |||||||||||.||
RBAM_004660__   1181 TGACGAACCGAAAATGGGTGAC----GGCTCTCGCCTGGCTGATTGCGGT   1226

BSNT_00751___   1227 AT---TGATCGTTGCTTTGAATGTGTTTTTAATTGTA-GATACGTTTCGA   1272
                     .|   |||||| .||||  |||.|||||.|.| |.|| |||.|.||.||.
RBAM_004660__   1227 TTTGGTGATCG-CGCTT--AATCTGTTTGTGA-TCTACGATTCATTCCGT   1272

BSNT_00751___   1273 TAA   1275
                     ||.
RBAM_004660__   1273 TAG   1275


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.