Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00758 and RBAM_004730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence dna-align/BSNT_00758___gsiB.1.9828.seq
# -bsequence dna-align/RBAM_004730___gsiB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00758___gsiB-RBAM_004730___gsiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00758___gsiB-RBAM_004730___gsiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00758___gsiB
# 2: RBAM_004730___gsiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 327/375 (87.2%)
# Similarity: 327/375 (87.2%)
# Gaps: 6/375 ( 1.6%)
# Score: 1445.0
#
#
#=======================================
BSNT_00758___ 1 ATGGC---AGATAATAACAAAATGAGCAGAGAAGAAGCAGGTAGAAAAGG 47
||||| |||||||||||||||||||||||||||||||||||.||||||
RBAM_004730__ 1 ATGGCACAAGATAATAACAAAATGAGCAGAGAAGAAGCAGGTAAAAAAGG 50
BSNT_00758___ 48 CGGAGAAACAACAAGCAAGAACCATGACAAAGAATTCTATCAAGAGATTG 97
|||||||.||||||||||.|||||||||||||||||||||||.||.||||
RBAM_004730__ 51 CGGAGAAGCAACAAGCAATAACCATGACAAAGAATTCTATCAGGAAATTG 100
BSNT_00758___ 98 GTCAAAAAGGCGGAGAAGCCACTAGCAAAAACCATGACAAAGAATTCTAT 147
|||||||||||||||||||.||.||||||||.||.|||||||||||||||
RBAM_004730__ 101 GTCAAAAAGGCGGAGAAGCAACAAGCAAAAATCACGACAAAGAATTCTAT 150
BSNT_00758___ 148 CAAGAGATTGGTCAAAAAGGCGGAGAAGCCACTAGCAAGAATCATGACAA 197
||.||.||.|||.||||||||||||||||.||.|||||.|||||.|||||
RBAM_004730__ 151 CAGGAAATCGGTGAAAAAGGCGGAGAAGCAACAAGCAAAAATCACGACAA 200
BSNT_00758___ 198 AGAGTTCTATCAAGAAATCGGTGAAAAAGGCGGAGAAGCCACTAGCAAAA 247
|||.||||||||.||||||||||||||||||||||||||.||.|||||.|
RBAM_004730__ 201 AGAATTCTATCAGGAAATCGGTGAAAAAGGCGGAGAAGCAACAAGCAATA 250
BSNT_00758___ 248 ACCATGACAAAGAATTCTATCAAGAAATCGGCCGAAAAGGCGGAGAGGCA 297
||||||||||.||||||||||||||||||||||.||||||||||||.||.
RBAM_004730__ 251 ACCATGACAAGGAATTCTATCAAGAAATCGGCCAAAAAGGCGGAGAAGCC 300
BSNT_00758___ 298 ACAAGCAAAAATCATGATAAAGAATTCTACCAAGAAATTGGCTCAAAAGG 347
|||||.|||||||||||.|||||.||.||..|.|||||.|||..||||||
RBAM_004730__ 301 ACAAGTAAAAATCATGACAAAGATTTTTATAAGGAAATCGGCCAAAAAGG 350
BSNT_00758___ 348 CGGAAACGCCCGCAACAACGACTAA 372
|||||||...||.|.|| .||||
RBAM_004730__ 351 CGGAAACAGACGAAGCA---GCTAA 372
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