Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00767 and RBAM_004800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence dna-align/BSNT_00767___dctP.1.9828.seq
# -bsequence dna-align/RBAM_004800___dctP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00767___dctP-RBAM_004800___dctP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00767___dctP-RBAM_004800___dctP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00767___dctP
# 2: RBAM_004800___dctP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1266
# Identity: 1029/1266 (81.3%)
# Similarity: 1029/1266 (81.3%)
# Gaps: 9/1266 ( 0.7%)
# Score: 4219.0
#
#
#=======================================
BSNT_00767___ 1 ATGAAACTGTTTAAAAATTTAACAGTTCAGGTCATAACCGCGGTCATCAT 50
||||||.|.||.||||||.|.||.||.||||||||.||.|||||.|||||
RBAM_004800__ 1 ATGAAAATTTTCAAAAATCTTACGGTGCAGGTCATCACGGCGGTGATCAT 50
BSNT_00767___ 51 CGGGGTCATTGTCGGGCTGGTCTGGCCGGATGTCGGCAAAGAAATGAAAC 100
|||.|||||||||||.||.||.|||||.||.|.|||.||..|.|||||.|
RBAM_004800__ 51 CGGCGTCATTGTCGGACTCGTATGGCCTGAGGCCGGGAAGCAGATGAAGC 100
BSNT_00767___ 101 CGCTTGGCGATACATTTATCAACGCTGTTAAAATGGTGATCGCACCAATT 150
||||.|||||||||||||||||.||.||.||||||.|.||||||||.||.
RBAM_004800__ 101 CGCTCGGCGATACATTTATCAATGCGGTAAAAATGATTATCGCACCGATC 150
BSNT_00767___ 151 ATTTTCTTCACAATCGTTCTCGGGATTGCAAAAATGGGCGATATGAAGAA 200
||.|||.|.||.|||||.||.||.||.||.||.|||||.||.|||||.||
RBAM_004800__ 151 ATATTCCTGACGATCGTGCTTGGCATCGCCAAGATGGGAGACATGAAAAA 200
BSNT_00767___ 201 GGTTGGAAAAGTAGGGGGAAAAGCGTTTATCTATTTCGAGGTTGTCACCA 250
.||.||.|||||.|||||||||||.|||||.|||||.||.||.||.||||
RBAM_004800__ 201 AGTCGGCAAAGTCGGGGGAAAAGCATTTATTTATTTTGAAGTCGTGACCA 250
BSNT_00767___ 251 CCCTCGCACTCATTATCGGTTTATTTGTCGTCAATATTATGAAGCCGGGT 300
||.||||.||.||||||||..|..|.|||||||||||.|||||.||.|||
RBAM_004800__ 251 CCATCGCCCTTATTATCGGACTTCTGGTCGTCAATATCATGAAACCCGGT 300
BSNT_00767___ 301 GCGGGTCTTGATTACAGCAAGCTTGAAAAGGGAGATGTATCACAATACAC 350
|.|||.|||||||||||||||||||||||.||.|||||.||.||.|||||
RBAM_004800__ 301 GAGGGGCTTGATTACAGCAAGCTTGAAAAAGGGGATGTCTCTCAGTACAC 350
BSNT_00767___ 351 GCAAAATGGCGGTCAGGGAATCGACTGGATTGAATTTGTTACACACATTG 400
||||||.||.||.|||||.||.|||||||||||||||.|.||.|||||.|
RBAM_004800__ 351 GCAAAACGGGGGACAGGGGATTGACTGGATTGAATTTATCACTCACATCG 400
BSNT_00767___ 401 TTCCATCCAATATGGTTGATGCCTTCGCAAAAGGGGACATTTTGCAGGTC 450
||||.||.|||||||||||.||.|||||||||||.||||||.|.||||||
RBAM_004800__ 401 TTCCGTCAAATATGGTTGACGCTTTCGCAAAAGGCGACATTCTTCAGGTC 450
BSNT_00767___ 451 TTATTCTTTTCTATTCTTTTCGGAGTGGGTCTTGCGGCATTAGGCGAAAA 500
||||||||||||.||.|.|||||.||.||.||.||.||..|.||.|||..
RBAM_004800__ 451 TTATTCTTTTCTGTTTTATTCGGTGTCGGCCTGGCTGCGCTCGGTGAACG 500
BSNT_00767___ 501 AGGGAAAAGCGTCATTGATTTCTTCGACAAGGTTTCTCACGTTTTTTTCA 550
|||.||||||.|.|||||||||||.||.||..|.||.|||||||||||||
RBAM_004800__ 501 AGGCAAAAGCATTATTGATTTCTTTGATAAACTGTCGCACGTTTTTTTCA 550
BSNT_00767___ 551 AAATTATCGGCTACATTATGCGTGCCGCGCCAATCGGGGCATTCGGGGCG 600
||||.|||||||||||.|||||.||.|||||.|||||.||||||||.||.
RBAM_004800__ 551 AAATCATCGGCTACATCATGCGCGCGGCGCCGATCGGCGCATTCGGAGCC 600
BSNT_00767___ 601 ATGGCGTATACAATCGGACACTTCGGGCTCGATTCCATCAAACCGCTGGC 650
|||||.|||||.|||||.||||||||.||.|||||||||||.||||||||
RBAM_004800__ 601 ATGGCCTATACGATCGGGCACTTCGGCCTTGATTCCATCAAGCCGCTGGC 650
BSNT_00767___ 651 AAGCTTAATGATGTCTGTTTATATTACGATGTTCCTGTTCGTATTTGTTG 700
.||..|.|||.|||||||.||..||||||||||||||||.||||||||.|
RBAM_004800__ 651 GAGTCTGATGCTGTCTGTATACGTTACGATGTTCCTGTTTGTATTTGTCG 700
BSNT_00767___ 701 CTTTAAATATCATCTGCAAGCTTTACGGATTCAGCCTGTGGAATTACCTT 750
||||.||||||||.|||||.||.|.|||.||||||.|||||||.||.||.
RBAM_004800__ 701 CTTTGAATATCATTTGCAAACTATTCGGTTTCAGCTTGTGGAACTATCTC 750
BSNT_00767___ 751 CGCTTCATTAAGGATGAGCTTCTGATCGTGCTTGGCACAAGCTCTTCCGA 800
||.||.|||||.|||||.||.||.|||||.||.||||||||||||||.||
RBAM_004800__ 751 CGTTTTATTAAAGATGAACTGCTCATCGTTCTCGGCACAAGCTCTTCTGA 800
BSNT_00767___ 801 ATCGGTGCTTCCGCGTATGATGGATAAAATGGAGCGCTACGGCTGTTCCA 850
.||.||.||||||||.||||||||||||||||||||||||||||||||||
RBAM_004800__ 801 GTCCGTCCTTCCGCGGATGATGGATAAAATGGAGCGCTACGGCTGTTCCA 850
BSNT_00767___ 851 AATCCGTTGTCGGGCTAGTTATTCCGACGGGCTATTCGTTTAACCTCGAC 900
||||.||||||||.||.||.|||||||||||.|||||.||||||||.|||
RBAM_004800__ 851 AATCGGTTGTCGGCCTTGTCATTCCGACGGGATATTCTTTTAACCTGGAC 900
BSNT_00767___ 901 GGCACATCCATTTATTTATCAATGGCGACTGTCTTTCTGGCACAGGTGTT 950
|||||.||.||||||.|.||.||||||||.||.||||||||.||||||||
RBAM_004800__ 901 GGCACCTCAATTTATCTGTCCATGGCGACAGTTTTTCTGGCGCAGGTGTT 950
BSNT_00767___ 951 TGGAGTAGACCTCAGCATCGGCCAGCAAATTACGATTATCCTCGTTCTGA 1000
.||.||.|||||.|.||||||||||||..|||||||.||.|||||.||||
RBAM_004800__ 951 CGGCGTTGACCTTACCATCGGCCAGCAGGTTACGATCATTCTCGTGCTGA 1000
BSNT_00767___ 1001 TGCTGACATCGAAGGGAGCGGCAGGTGTGACAGGAAGCGGATTTATCGTC 1050
||||||||||.||.||.|||||.||.||.||.||||||||.||||||||.
RBAM_004800__ 1001 TGCTGACATCAAAAGGCGCGGCGGGCGTAACCGGAAGCGGGTTTATCGTG 1050
BSNT_00767___ 1051 CTTGCCTCAACGCTGTCAGCGCTGCAGGTCATTCCGCTGGAGGGTCTTGC 1100
||.|||||.||..|.||.|||||.|||||.||||||||||||||.||.||
RBAM_004800__ 1051 CTCGCCTCCACTTTATCGGCGCTCCAGGTTATTCCGCTGGAGGGGCTGGC 1100
BSNT_00767___ 1101 ACTCCTGCTCGGGGTCGACCGTTTCATGAGTGAAGGAAGAGCCATTGTGA 1150
.||.||.|||||.||||||||.||.||||||||||||||.||.||.||.|
RBAM_004800__ 1101 GCTGCTCCTCGGCGTCGACCGCTTTATGAGTGAAGGAAGGGCGATCGTCA 1150
BSNT_00767___ 1151 ACCTAATCGGAAACGGAATCGCCACGATCATTGTTGCCAAAAGCGAAAAT 1200
||||.||||||||||||||||||||.|||||.||.|||||.|||||||||
RBAM_004800__ 1151 ACCTGATCGGAAACGGAATCGCCACCATCATCGTAGCCAAGAGCGAAAAT 1200
BSNT_00767___ 1201 GAATTTGATGAAGCAAAAAGCGTAGAGGCTGTTGAAGGCATGAAAAAAAT 1250
||.|||||.|||||.||||||..|.||||.||| |||.||||
RBAM_004800__ 1201 GAGTTTGACGAAGCGAAAAGCACACAGGCCGTT---------AAAGAAAT 1241
BSNT_00767___ 1251 GAAAACAGCAGTCTGA 1266
||||||.||.||.|.|
RBAM_004800__ 1242 GAAAACGGCGGTATAA 1257
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