Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00799 and RBAM_005020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_00799___rsbS.1.9828.seq
# -bsequence dna-align/RBAM_005020___rsbS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00799___rsbS-RBAM_005020___rsbS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00799___rsbS-RBAM_005020___rsbS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00799___rsbS
# 2: RBAM_005020___rsbS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 314/366 (85.8%)
# Similarity: 314/366 (85.8%)
# Gaps: 0/366 ( 0.0%)
# Score: 1362.0
#
#
#=======================================
BSNT_00799___ 1 TTGAGACATCCGAAAATCCCGATCTTGAAACTGTATAATTGCTTATTAGT 50
.||||||||||.||||||||||||.|||||||||||||.||||||||.||
RBAM_005020__ 1 GTGAGACATCCAAAAATCCCGATCCTGAAACTGTATAACTGCTTATTGGT 50
BSNT_00799___ 51 ATCCATTCAATGGGAACTTGATGACCAGACAGCATTAACTTTTCAAGAAG 100
||||||.||||||||||||||.||.||||||||.||...|||||||||||
RBAM_005020__ 51 ATCCATCCAATGGGAACTTGACGATCAGACAGCTTTGCATTTTCAAGAAG 100
BSNT_00799___ 101 ACTTATTAAATAAAATATACGAAACAGGTGCTAACGGAGTCGTCATTGAC 150
|..|..|.||.|||||.||.|||||.||.||.|||||.||||||||||||
RBAM_005020__ 101 ATCTGCTGAACAAAATCTATGAAACCGGCGCAAACGGGGTCGTCATTGAC 150
BSNT_00799___ 151 CTGACATCTGTGGATATGATTGATTCATTTATCGCGAAAGTGCTGGGCGA 200
||||||||.||.||.|||||.|||||||||||||||||||||||.|||||
RBAM_005020__ 151 CTGACATCCGTTGACATGATCGATTCATTTATCGCGAAAGTGCTCGGCGA 200
BSNT_00799___ 201 CGTCATTACAATGTCTAAGTTAATGGGGGCTAAAGTCGTCTTGACCGGCA 250
.|||||.||.||||||||.||.|||||.||.||.|||||.|||||.||.|
RBAM_005020__ 201 TGTCATCACCATGTCTAAATTGATGGGCGCAAAGGTCGTATTGACGGGAA 250
BSNT_00799___ 251 TTCAGCCCGCTGTGGCAGTGACGCTGATTGAACTTGGAATCGCGCTTGAG 300
|||||||.||||||||.||.||..||||||||||.||||||.|.||||||
RBAM_005020__ 251 TTCAGCCGGCTGTGGCGGTCACATTGATTGAACTCGGAATCTCACTTGAG 300
BSNT_00799___ 301 GAAATCGAAACTGCGCTCGACTTAGAGCAGGGGCTTGAGACATTGAAGCG 350
|||||.|||||.||||||||.||||||||.||||||||||||||||||||
RBAM_005020__ 301 GAAATTGAAACGGCGCTCGATTTAGAGCAAGGGCTTGAGACATTGAAGCG 350
BSNT_00799___ 351 GGAATTGGGGGAATAG 366
||||||||||||||||
RBAM_005020__ 351 GGAATTGGGGGAATAG 366
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