Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00805 and RBAM_005080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_00805___rsbX.1.9828.seq
# -bsequence dna-align/RBAM_005080___rsbX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00805___rsbX-RBAM_005080___rsbX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00805___rsbX-RBAM_005080___rsbX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00805___rsbX
# 2: RBAM_005080___rsbX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 607
# Identity: 461/607 (75.9%)
# Similarity: 461/607 (75.9%)
# Gaps: 11/607 ( 1.8%)
# Score: 1704.0
#
#
#=======================================
BSNT_00805___ 1 ATGATCCAGGTTGAAGAAAACGAGCATATTCAAACTCTAGTATATCAACT 50
|||||.||||||||||||||.||.|||.||||||||||.|||||.|||.|
RBAM_005080__ 1 ATGATTCAGGTTGAAGAAAATGAACATGTTCAAACTCTTGTATACCAATT 50
BSNT_00805___ 51 GAATAAAGAAGGGAAATCGATTTGCGGTGACAGCTTTTTTATGAAAGCTG 100
.|||||||||||.||.||.||.|||||.|||||||||||||||||.||..
RBAM_005080__ 51 AAATAAAGAAGGCAAGTCCATATGCGGCGACAGCTTTTTTATGAAGGCGA 100
BSNT_00805___ 101 ATGATAAGGAGTTAATTTGCGCGGTTGCTGACGGACTGGGAAGTGGATCA 150
||||..|.||.||..||||||||||.||.|||||.||.||.||.|||||.
RBAM_005080__ 101 ATGAAGAAGAATTCGTTTGCGCGGTAGCGGACGGTCTCGGCAGCGGATCT 150
BSNT_00805___ 151 CTTGCTAACGAATCCTCTGCAGCCATCAAAGACTTAGTGGAAAACTATGC 200
|||||.|||||||||||..|||||||.||||||.|.|||||||..|||||
RBAM_005080__ 151 CTTGCCAACGAATCCTCGTCAGCCATTAAAGACATCGTGGAAACGTATGC 200
BSNT_00805___ 201 GAGTGAAGACGTAGAAAGCATTATCGAACGCTGTAATCAGGCGATGAAAA 250
|.||||.||.||.||||||||.||.||.|||||.|||||.||||||||||
RBAM_005080__ 201 GGGTGAGGATGTGGAAAGCATCATTGAGCGCTGCAATCAAGCGATGAAAA 250
BSNT_00805___ 251 ACAAAAGAGGCGCTACAGCATCTATCCTGAAAATCAATTT--TGAGCAAA 298
||||||||||.||.||.||.||.|||.|.||||||||||| |.| |||
RBAM_005080__ 251 ACAAAAGAGGGGCGACTGCCTCCATCTTAAAAATCAATTTCATCA--AAA 298
BSNT_00805___ 299 GGCAGTTTACGTACTGCTCTGTCGGAAATGTACGGTTTATT-CTGCATTC 347
||.|.||.||.||||||||..||||.||.|| |.||||.|| |||||.||
RBAM_005080__ 299 GGGAATTGACATACTGCTCGATCGGCAACGT-CCGTTTCTTCCTGCACTC 347
BSNT_00805___ 348 CCCGTCTGGTGAAAGCTTTTATCCTCTGCCGATTTCGGGCTATTTATCAG 397
|||.||.||.|||..||||.||||.||||||||||||||.||..|.||||
RBAM_005080__ 348 CCCATCAGGCGAAGTCTTTCATCCGCTGCCGATTTCGGGTTACCTCTCAG 397
BSNT_00805___ 398 GCAAGCCGCAAAAATACAAAACGCACACCGCCA-CCTATGAAAAGGGTTC 446
||||.|||||||.||||||||||.|.| ||.|| |.||.|||||.||..|
RBAM_005080__ 398 GCAAACCGCAAAGATACAAAACGTATA-CGTCATCATACGAAAAAGGGGC 446
BSNT_00805___ 447 AAAGTTCATTATACATACAGATGGACTCAACGTACCTGATATCCGCTCCC 496
.|..|||||.||..|.||.|||||.||..|.||.||..||||||||.||.
RBAM_005080__ 447 GAGATTCATCATCTACACGGATGGGCTTGAGGTTCCGCATATCCGCACCT 496
BSNT_00805___ 497 ATTTAAAAAAAGGCCAATCGGTAGAAGAAATATCGAATTCGCTGAAGATG 546
..|||||..|.||.||.||..|||||||.|||||.||.||.||..|...|
RBAM_005080__ 497 GCTTAAAGCAGGGACACTCAATAGAAGATATATCAAAATCACTTCATCCG 546
BSNT_00805___ 547 TATACGACATCGAGAAAAGATGACCTGACCTATATTCTCGGACAGCTGTC 596
||.||.|||||.|||...|||||..|||||||||||||.||.|||||.|.
RBAM_005080__ 547 TACACAACATCCAGACGTGATGATTTGACCTATATTCTAGGGCAGCTTTT 596
BSNT_00805___ 597 CTAG--- 600
.|.|
RBAM_005080__ 597 ATCGTAA 603
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