Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00896 and RBAM_005670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence dna-align/BSNT_00896.1.9828.seq
# -bsequence dna-align/RBAM_005670___ydeH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00896-RBAM_005670___ydeH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00896-RBAM_005670___ydeH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00896
# 2: RBAM_005670___ydeH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 304/385 (79.0%)
# Similarity: 304/385 (79.0%)
# Gaps: 14/385 ( 3.6%)
# Score: 1197.5
#
#
#=======================================
BSNT_00896 1 TTGTTAAAAAGGTTTTCTCTTGTTTTTGTTACACTAATGATGTCTATACT 50
|||.|.||||||||||.||||||||||.||||.||.||.|||||||||.|
RBAM_005670__ 1 TTGCTGAAAAGGTTTTTTCTTGTTTTTCTTACGCTGATAATGTCTATATT 50
BSNT_00896 51 TGTTGTTTTAGCGGCCGCTAAAGAGTCGCCTGGAGATCATGTCATCTCAT 100
||.|||.||.|||||.|||.|||||||.||.||.||||.||||||.||.|
RBAM_005670__ 51 TGCTGTATTCGCGGCTGCTGAAGAGTCTCCCGGCGATCGTGTCATTTCTT 100
BSNT_00896 101 TTGATGAACCTCTTATCTTGATGATCTCAATTGGAATCGTTGTATTTTTA 150
||||.||.|||||.||.||..||||||||.|.||||||.|..|||.|||.
RBAM_005670__ 101 TTGACGAGCCTCTGATTTTATTGATCTCACTCGGAATCATCTTATGTTTG 150
BSNT_00896 151 TTTATCCCTCCATTAGTCATGTCCTTTTTTGGCAATTTGGTTGTAAGAAT 200
||.||.||.|||||.|||||||||||||||||||..||||||||.|||||
RBAM_005670__ 151 TTCATTCCGCCATTCGTCATGTCCTTTTTTGGCAGCTTGGTTGTGAGAAT 200
BSNT_00896 201 AATATCTGGTGTATACCAATGTTTTATCGTTTTCACTTTTCTGGGGCTCA 250
.|||||.||.||.||.||||||||||||||..||||.|||..|||.||||
RBAM_005670__ 201 CATATCCGGAGTCTATCAATGTTTTATCGTCCTCACGTTTGCGGGCCTCA 250
BSNT_00896 251 TTCCAATTGGATTTCTTATTCCCAATGGCTTTTTGACAATTCTAGTTTC- 299
||||.|||||||||||.||||||||||||||||||||||||||.|.|.|
RBAM_005670__ 251 TTCCGATTGGATTTCTGATTCCCAATGGCTTTTTGACAATTCTTGCTGCC 300
BSNT_00896 300 -TATTGCAGGAACTTTAGTCAGTATAGCTAGTGTTGCCGTAACCTTATGC 348
||.| |||.|||||.||||||..|||.|||||||||||.|||||||.|
RBAM_005670__ 301 GTACT--AGGGACTTTGGTCAGTTCAGCGAGTGTTGCCGTGACCTTATTC 348
BSNT_00896 349 ATTGGCAAGAATAAAA--------AAGATATATAA 375
.||||||.||| |||| |||.| |.|||
RBAM_005670__ 349 GTTGGCAGGAA-AAAAGAGGCCGGAAGGT-TTTAA 381
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