Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03916 and RBAM_005740
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_03916___adhA.1.9828.seq
# -bsequence dna-align/RBAM_005740___adhA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03916___adhA-RBAM_005740___adhA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03916___adhA-RBAM_005740___adhA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03916___adhA
# 2: RBAM_005740___adhA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1057
# Identity: 845/1057 (79.9%)
# Similarity: 845/1057 (79.9%)
# Gaps: 14/1057 ( 1.3%)
# Score: 3388.0
#
#
#=======================================
BSNT_03916___ 1 ATGTGTAATCAACATCAAACCCGTGTATTAAGCGTGTCACATGCAAAAGC 50
|||||.|||.|.||||..||.|||||||||||||...|.|||||||||||
RBAM_005740__ 1 ATGTGCAATAATCATCCGACTCGTGTATTAAGCGCTCCGCATGCAAAAGC 50
BSNT_03916___ 51 CAAATTTGAACAAACGACGATTGAGCGAAGAGGATTACGGCCGCACGATG 100
.||||||||.|..||||||||||||.||||||.||||||||||||||||.
RBAM_005740__ 51 TAAATTTGAGCGGACGACGATTGAGAGAAGAGCATTACGGCCGCACGATA 100
BSNT_03916___ 101 TCTTAATCGATATTAAATTCAGCGGTATTTGCCATTCAGACATTCATAGT 150
||.|.||.||||||||.|.||||||.|||||.||.||||||||.||.|||
RBAM_005740__ 101 TCCTGATTGATATTAAGTACAGCGGGATTTGTCACTCAGACATCCACAGT 150
BSNT_03916___ 151 GCTTTTGATGAATGGGGCGGTGGCATCTTCCCAATGGTGCCAGGACATGA 200
||.||.||||||||||||||.||.|||||.||.|||||.||.|||||.||
RBAM_005740__ 151 GCATTCGATGAATGGGGCGGCGGAATCTTTCCGATGGTTCCCGGACACGA 200
BSNT_03916___ 201 AATAGCCGGTGTCGTAACAGCCGTTGGAGCAGAAGTCACCAAATTTGCTG 250
|||.|||||.||.||...||||||.||.|.|||||||||||.||||||.|
RBAM_005740__ 201 AATTGCCGGAGTTGTGGAAGCCGTGGGTGAAGAAGTCACCACATTTGCCG 250
BSNT_03916___ 251 TCGGGGACCGCGTTGGTGTCGGCTGTTTTGTTGACTCATGCGGAGAATGC 300
||||.|||||.||.|||||||||||||||||.|||||.|||||.|||||.
RBAM_005740__ 251 TCGGAGACCGTGTGGGTGTCGGCTGTTTTGTAGACTCCTGCGGGGAATGT 300
BSNT_03916___ 301 GAATACTGTCTAAACGGAGAGGAACAGTTCTGCACGAAGGGTGTTGTTCA 350
||||||||.||.||||||||.|||||.|..|||||.||.||.||||||||
RBAM_005740__ 301 GAATACTGCCTTAACGGAGACGAACAATATTGCACAAAAGGCGTTGTTCA 350
BSNT_03916___ 351 AACGTATAACTCAGTA-----GACTACGACGGAAACCCCACTTATGGCGG 395
.||.||||| || |||||||||||||||||.||.||.|||||
RBAM_005740__ 351 GACTTATAA-----TAACCTGGACTACGACGGAAACCCTACGTACGGCGG 395
BSNT_03916___ 396 GTACAGCCAAAAAATCGTTGTCACTGACAGATTTGTTGTTCGAATCCCAG 445
.||||||||.|||||.|||||||||||||||||.|||||.||.||.||.|
RBAM_005740__ 396 CTACAGCCAGAAAATAGTTGTCACTGACAGATTCGTTGTCCGGATTCCGG 445
BSNT_03916___ 446 ATCGTTTGGAAATGGATGTTGCCAGTCCGCTGTTGTGTGCAGGTATCACA 495
|||...||||..||||||.||||||.|||||.|||||.||.||.||.||.
RBAM_005740__ 446 ATCAGCTGGATTTGGATGCTGCCAGCCCGCTATTGTGCGCGGGCATTACC 495
BSNT_03916___ 496 ACATATTCTCCGCTGAAACACTGGAATGTTGGCCCGGGTAAAAAAGTTGC 545
||.|||||||||||||||||||||||||..|||||.||.||||||||.||
RBAM_005740__ 496 ACCTATTCTCCGCTGAAACACTGGAATGCCGGCCCCGGCAAAAAAGTGGC 545
BSNT_03916___ 546 GATTGTAGGCGTGGGTGGCCTTGGACATTTGGCGATTCAATTTGCACATG 595
||||||.||..||||.||.||.||||||||.||..|||||||.||.||.|
RBAM_005740__ 546 GATTGTCGGAATGGGCGGACTCGGACATTTAGCCGTTCAATTCGCGCACG 595
BSNT_03916___ 596 CGATGGGTGCAGAGGTAACCGTCCTGAGCCGTTCCATGAATAAGAAAGAG 645
|..|.||.||||||||.||||||||.|||||.||.|||||.||.|||||.
RBAM_005740__ 596 CTTTAGGCGCAGAGGTCACCGTCCTCAGCCGCTCAATGAACAAAAAAGAC 645
BSNT_03916___ 646 GAAGCTCTGGAACTCGGTGCAAATCATTACTTTGCAACAAGTGACCCAGC 695
|||||.||.|||.|.||.||..|||||||||||||.|||||.||.||.|.
RBAM_005740__ 646 GAAGCGCTTGAATTTGGAGCCGATCATTACTTTGCCACAAGCGATCCGGA 695
BSNT_03916___ 696 CACATTCACTGCATTGGCCGGGCGTTTTGACGTGATCTTAAATACGGTAT 745
.|||||.||||...|||||||.||.|||||..|.||.||||||||.||||
RBAM_005740__ 696 TACATTTACTGAGCTGGCCGGACGATTTGATCTTATTTTAAATACAGTAT 745
BSNT_03916___ 746 CGGCAAATCTCGATGTAGATGCCTATTTATCAATGCTTCGTATAGACGGG 795
|.||.||.||.||.|||||||||||.|||||..|||||||.||.|||||.
RBAM_005740__ 746 CCGCGAACCTTGACGTAGATGCCTACTTATCCCTGCTTCGCATTGACGGT 795
BSNT_03916___ 796 ACACTTGTAAACGTTGGAGCTCCTGCCAAGCCGGACACATACAGTGTGTT 845
|||.|.|||||.||.|||||.||.||.|||||||||.|||||||||||||
RBAM_005740__ 796 ACATTGGTAAATGTGGGAGCGCCCGCTAAGCCGGACTCATACAGTGTGTT 845
BSNT_03916___ 846 TTCCCTAATCATGGGGCGCCGCAGCATTGCAGGTTCTCTAGTCGGCGGAA 895
.|||.||||||.|||.||||||||||||||.|||||.||.||||||||.|
RBAM_005740__ 846 CTCCTTAATCACGGGCCGCCGCAGCATTGCTGGTTCACTCGTCGGCGGTA 895
BSNT_03916___ 896 TTCAAGAAACTCAAGAGATGCTGGATTTCGCAGCTGAGCATGGCATCGAA 945
|||...|.|||||.||||||||.||||||||.||.|||||.|||||.|..
RBAM_005740__ 896 TTCCGCAGACTCAGGAGATGCTTGATTTCGCCGCCGAGCACGGCATTGCT 945
BSNT_03916___ 946 CCTAAAATCGAAGTCAT--CGGAGCTGACCAAGTGGACGAAGCATACGAA 993
||||||||.|||||.|| || ||..|.|||||.||||||||.||||||
RBAM_005740__ 946 CCTAAAATTGAAGTGATACCG--GCCAATCAAGTCGACGAAGCGTACGAA 993
BSNT_03916___ 994 CGTATCCTCCGAAGCGATGTCCGCTATCGATTTGTGATTGATATTTCCAC 1043
||..|.||||||||||||||||||||.||.||.||.|||||||||||.||
RBAM_005740__ 994 CGGGTTCTCCGAAGCGATGTCCGCTACCGTTTCGTCATTGATATTTCAAC 1043
BSNT_03916___ 1044 ATTGTAA 1050
.||.|||
RBAM_005740__ 1044 TTTATAA 1050
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