Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01040 and RBAM_006420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence dna-align/BSNT_01040___rex.1.9828.seq
# -bsequence dna-align/RBAM_006420___rex.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01040___rex-RBAM_006420___rex.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01040___rex-RBAM_006420___rex.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01040___rex
# 2: RBAM_006420___rex
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 650
# Identity: 556/650 (85.5%)
# Similarity: 556/650 (85.5%)
# Gaps: 4/650 ( 0.6%)
# Score: 2399.0
#
#
#=======================================
BSNT_01040___ 1 ATGAATAAGGATCAATCAAAAATTCCGCAGGCGACGGCGAAACGGCTGCC 50
|||||.||||||||||||||||||||.|||||||||||.|||||||||||
RBAM_006420__ 1 ATGAACAAGGATCAATCAAAAATTCCACAGGCGACGGCAAAACGGCTGCC 50
BSNT_01040___ 51 GCTTTACTATCGCTTTTTAAAGAATCTTCATGCGTCAGGAAAACAGCGTG 100
||||||.||||||||||||||||||.|.||.|||||||||||||||||.|
RBAM_006420__ 51 GCTTTATTATCGCTTTTTAAAGAATTTACACGCGTCAGGAAAACAGCGCG 100
BSNT_01040___ 101 TATCATCCGCTGAACTTAGTGATGCCGTAAAGGTTGATTCTGCCACGATT 150
|.|||||.||||||||.||.||.||.|||||.||.|||||.||||||||.
RBAM_006420__ 101 TTTCATCAGCTGAACTGAGCGACGCGGTAAAAGTCGATTCGGCCACGATC 150
BSNT_01040___ 151 CGGAGGGATTTTTCCTATTTTGGAGCTCTTGGCAAAAAAGGATACGGATA 200
||..||||||||||||||||.||.||.||.|||||||||||||||||.||
RBAM_006420__ 151 CGCCGGGATTTTTCCTATTTCGGGGCGCTCGGCAAAAAAGGATACGGCTA 200
BSNT_01040___ 201 TAATGTGGATTATTTGCTGTCTTTTTTCCGAAAAACGCTTGATCAGGATG 250
||||||||||||..|||||||.||||||.|||||||.||.||||||||||
RBAM_006420__ 201 TAATGTGGATTACCTGCTGTCATTTTTCAGAAAAACACTGGATCAGGATG 250
BSNT_01040___ 251 AGATGACAGACGTCATCTTGATTGGTGTCGGGAACTTGGGAACGGCATTT 300
|.|.|||..|||||||.|||||.|||||||||||.||.||.|||||.|||
RBAM_006420__ 251 AAACGACGAACGTCATTTTGATCGGTGTCGGGAATTTAGGGACGGCGTTT 300
BSNT_01040___ 301 CTTCACTATAATTTCACAAAAAACAATAACACAAAAATTTCTATGGCTTT 350
|||||||||||||||||||||||.||||||||||||||.|||||||||||
RBAM_006420__ 301 CTTCACTATAATTTCACAAAAAATAATAACACAAAAATATCTATGGCTTT 350
BSNT_01040___ 351 TGATATAAATGAGAGTAAAATAGGAACTGAGGTAGGCGGCGTGCCCGTCT 400
||||.|.|||.||||||||||||||||||||||||||||.|||||.||||
RBAM_006420__ 351 TGATGTGAATCAGAGTAAAATAGGAACTGAGGTAGGCGGTGTGCCTGTCT 400
BSNT_01040___ 401 ATAACCTTGATGACCTTGAACAACACGTAAAAGATGAATCAGTTGCCATT 450
.|.|.|||.||||..|.||.|..|||.|.||.||||||.|.||.||.|||
RBAM_006420__ 401 TTGATCTTAATGATTTAGAGCTTCACATTAAGGATGAACCCGTGGCGATT 450
BSNT_01040___ 451 CTTACAGTGCCAGCAGTTGCCGCTCAATCCATTACAGACAGATT--GGTC 498
|||||.||.||.||.||||||||.||.||.|||||.|||.|..| .|||
RBAM_006420__ 451 CTTACCGTTCCCGCGGTTGCCGCCCAGTCAATTACCGACCGGCTCGTGTC 500
BSNT_01040___ 499 GCATTAGGAATCAAGGGAATCCTTAATTTTACGCCGGCCCGTTTGAATGT 548
|| |.||||||||||||||||||||.|||||||||||||||||||||||
RBAM_006420__ 501 GC--TCGGAATCAAGGGAATCCTTAACTTTACGCCGGCCCGTTTGAATGT 548
BSNT_01040___ 549 GCCGGAACACATTCGAATTCATCATATAGATTTAGCAGTTGAGCTTCAGT 598
||||||.|||||||||||||||||||||||||||||.||.||||||||.|
RBAM_006420__ 549 GCCGGATCACATTCGAATTCATCATATAGATTTAGCTGTAGAGCTTCAAT 598
BSNT_01040___ 599 CACTGGTTTATTTTTTGAAGCATTATTCAGTTTTAGAGGAAATCGAATAA 648
||.||||||||||.||||||||||||||.|||||.||.|||||.|||||.
RBAM_006420__ 599 CATTGGTTTATTTCTTGAAGCATTATTCTGTTTTGGAAGAAATTGAATAG 648
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