Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01044 and RBAM_006450

See Amino acid alignment / Visit BSNT_01044 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence dna-align/BSNT_01044___ydiK.1.9828.seq
#    -bsequence dna-align/RBAM_006450___ydiK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01044___ydiK-RBAM_006450___ydiK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01044___ydiK-RBAM_006450___ydiK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01044___ydiK
# 2: RBAM_006450___ydiK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity:     156/192 (81.2%)
# Similarity:   156/192 (81.2%)
# Gaps:           0/192 ( 0.0%)
# Score: 636.0
# 
#
#=======================================

BSNT_01044___      1 ATGAGAAACCCGGTAGTTTGGGGAATGATCTACTTTGCCGTAGGGTGCAT     50
                     |||||.|||||..|...||||||..||||.||.||.||.||.||.||.||
RBAM_006450__      1 ATGAGGAACCCAATGACTTGGGGCTTGATTTATTTCGCAGTCGGCTGTAT     50

BSNT_01044___     51 CTTTACTTATCTTGCCGCAAGCTCACCAGGCAGCATGTGGTCATTTTACT    100
                     ||||||.|||.|.|||||||||||.||.||.|||||||||||.|||||.|
RBAM_006450__     51 CTTTACGTATTTGGCCGCAAGCTCTCCGGGAAGCATGTGGTCTTTTTATT    100

BSNT_01044___    101 CCATCCTGCTGATGGTGTTCGCCGCTTACAACATCAGCATTTCCTTTAAG    150
                     ||||.|||||||||||.|||||||||||.||.||||||||.||.|||||.
RBAM_006450__    101 CCATACTGCTGATGGTTTTCGCCGCTTATAATATCAGCATCTCGTTTAAA    150

BSNT_01044___    151 ATGTTCGCCTTTTCATTTAAAATCAAAAAGAACCAAAAATAA    192
                     ||||||||.||.|||||||||.|.|||||.||.|||||||||
RBAM_006450__    151 ATGTTCGCTTTCTCATTTAAAGTGAAAAAAAATCAAAAATAA    192


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