Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01126 and RBAM_006970
See
Amino acid alignment /
Visit
BSNT_01126 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence dna-align/BSNT_01126___yerB.1.9828.seq
# -bsequence dna-align/RBAM_006970___yerB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01126___yerB-RBAM_006970___yerB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01126___yerB-RBAM_006970___yerB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01126___yerB
# 2: RBAM_006970___yerB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1006
# Identity: 808/1006 (80.3%)
# Similarity: 808/1006 (80.3%)
# Gaps: 20/1006 ( 2.0%)
# Score: 3251.5
#
#
#=======================================
BSNT_01126___ 1 ATGAAAAAATGGATGACAGTTTGCGCGCTGTGTTTCGTGTTTTTTCTGCT 50
|||||||.|||||..||.|||||...|||.|||||.|.||||||.|||||
RBAM_006970__ 1 ATGAAAAGATGGAAAACCGTTTGTATGCTTTGTTTTGCGTTTTTGCTGCT 50
BSNT_01126___ 51 TGTATCCTGCCAGCAGAAGGATGCTGTCCCGGATAATGC-----AAAGAA 95
||...||||||.||||||..||||.|..|.|| ||| ||||||
RBAM_006970__ 51 TGCCGCCTGCCGGCAGAATAATGCCGATCAGG----TGCAGCCGAAAGAA 96
BSNT_01126___ 96 GCTGAAAGCTCCTTTAACGGGGCTAAAGACTGAACAGAAAGTGACTGAAC 145
|| |.|||||||||||||||||||.||.|||||.|||||..|..|.||||
RBAM_006970__ 97 GC-GGAAGCTCCTTTAACGGGGCTGAAAACTGAGCAGAAGCTTGCAGAAC 145
BSNT_01126___ 146 GCCGCCCTGTTGCTGTTGTGGTGAACAATCACCCGAAGGCGAGGCCGCAG 195
||||.||..||||.||.|..|||||||||||.||||||||||||||.||.
RBAM_006970__ 146 GCCGTCCGATTGCAGTCGCAGTGAACAATCATCCGAAGGCGAGGCCCCAA 195
BSNT_01126___ 196 TCGGGTCTGTCTAAAGCCGACATTGTCATAGAAGCGCTAGCCGAAGGGCA 245
||.||.|||||.||.||.||..|||||||.||||||||.||.||.||.|.
RBAM_006970__ 196 TCCGGGCTGTCAAAGGCGGATGTTGTCATCGAAGCGCTCGCGGAGGGCCG 245
BSNT_01126___ 246 AATCACAAGATTTCTGGCCATTTTCCAAAGCCAGATGCCTGAAACTGTCG 295
.||.||..|.|||||.||.|||||.|||||..|||||||.|||||.||||
RBAM_006970__ 246 GATTACGCGGTTTCTCGCGATTTTTCAAAGTGAGATGCCGGAAACGGTCG 295
BSNT_01126___ 296 GACCTGTGCGGAGCGCGCGGGAATATTTCGTCACTCTCAGCAATGGCTTT 345
|.|||||||||||||||.||||||||||.|||||.|||||||..||.|||
RBAM_006970__ 296 GGCCTGTGCGGAGCGCGAGGGAATATTTTGTCACGCTCAGCAGCGGGTTT 345
BSNT_01126___ 346 GACAGCATATTTGTCCATCACGGCTGGAGTCCCGGCGCCAAAGAGCAGCT 395
.|||||||||||||||||||.|||||||||||||||||.|||.|||||||
RBAM_006970__ 346 AACAGCATATTTGTCCATCATGGCTGGAGTCCCGGCGCAAAAAAGCAGCT 395
BSNT_01126___ 396 GGAATCCGGAGCTGCCGATTATATGAACGGATTGGATTTTGACGGAAGCT 445
|||.|||||||||..|||||||||.|||||.||||||||||||||||||.
RBAM_006970__ 396 GGAGTCCGGAGCTTACGATTATATAAACGGTTTGGATTTTGACGGAAGCC 445
BSNT_01126___ 446 TATTTTGGAGAGCTGATTTCAGCAAACCGCCCCACAATTCCTATACGTCT 495
|.|||||||||||.|||||||||||.|||||||||||||||||.|||||.
RBAM_006970__ 446 TGTTTTGGAGAGCCGATTTCAGCAAGCCGCCCCACAATTCCTACACGTCG 495
BSNT_01126___ 496 TATGATTACATAAAAAAGGCGGCGGAACAAAAGGGTTATAAGCTGAAGCA 545
|||||..|.||.|..|||||||||||||||||.||.||.|||||||| .
RBAM_006970__ 496 TATGACAATATCAGGAAGGCGGCGGAACAAAAAGGATACAAGCTGAA--C 543
BSNT_01126___ 546 GG--AAACAAATCCGCTGCTGTTTCAAACATCAGATGCAAAATCTGCAAA 593
|| |||||.|.|||||.|..|||||.|||||||||||||||.|.|.|||
RBAM_006970__ 544 GGAAAAACAGAACCGCTCCCATTTCAGACATCAGATGCAAAACCAGGAAA 593
BSNT_01126___ 594 TGAATCTTACAATGTTCGGGTAGATTATGGAACAAAAAACGTTACAAATC 643
||||.|.||||||.|||||.||||||||||||||.|||||.|||||||||
RBAM_006970__ 594 TGAAACCTACAATATTCGGATAGATTATGGAACACAAAACATTACAAATC 643
BSNT_01126___ 644 TTGTCGAATACAACTATGATAAAAAAGCTGAATCTTATACAAGAAGCTCT 693
|||||||||||.|.|||||||||||||||||..|||||||||||||||||
RBAM_006970__ 644 TTGTCGAATACGATTATGATAAAAAAGCTGATGCTTATACAAGAAGCTCT 693
BSNT_01126___ 694 GATGGTGTCATAACGACAGACCGGGAAACCGGAAAGCCGGTTGCAATACA 743
||||||||.|.|.|||||||||||||.|||||||||||..|.||.||.||
RBAM_006970__ 694 GATGGTGTGAAAGCGACAGACCGGGAGACCGGAAAGCCTTTAGCCATGCA 743
BSNT_01126___ 744 AAATATTTTCATTGTTGAAGCCAGCCATCATATTATTGATCAAGATGGAA 793
.||.|||||.||||||||||||.||||||..||.|..||..|||||||||
RBAM_006970__ 744 CAACATTTTTATTGTTGAAGCCGGCCATCGCATGACAGACAAAGATGGAA 793
BSNT_01126___ 794 GGCGGGACATCGACTTGGAATCAGGAGGAAAAGGTCTGTTGTTTCAGGAC 843
||||||.||||||..|..|.|||||.||.||.||.||..||.|||||.||
RBAM_006970__ 794 GGCGGGCCATCGATATTCAGTCAGGGGGGAAGGGCCTCCTGCTTCAGCAC 843
BSNT_01126___ 844 GGAAACGTCATTGAAACAGACTGGAAA---CAAGTGAATGGCAGAATTGT 890
||..|.||.||.||..||||||||.|| .||| |.|||.|.|||.|
RBAM_006970__ 844 GGCGATGTTATAGAGTCAGACTGGGAATATAAAG---ACGGCCGTATTCT 890
BSNT_01126___ 891 GCCGATAAAAGACGGCAAGTGGCTTCCGTTTGTGCCAGGAAAGACTTGGA 940
|||..||||||.|||..||...|||||||||||||||||||||||.||||
RBAM_006970__ 891 GCCCGTAAAAGGCGGTGAGATTCTTCCGTTTGTGCCAGGAAAGACATGGA 940
BSNT_01126___ 941 TCAATATCGTACCTGATCTTGATGCGGCTTCCATTAGTAAAGGAGAAGGT 990
|.||||||||.||||||||.|||||.||||||||||||||||||||||||
RBAM_006970__ 941 TTAATATCGTGCCTGATCTCGATGCAGCTTCCATTAGTAAAGGAGAAGGT 990
BSNT_01126___ 991 GTGTAA 996
||.|.|
RBAM_006970__ 991 GTTTGA 996
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.