Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01145 and RBAM_007060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence dna-align/BSNT_01145___opuE.1.9828.seq
# -bsequence dna-align/RBAM_007060___opuE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01145___opuE-RBAM_007060___opuE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01145___opuE-RBAM_007060___opuE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01145___opuE
# 2: RBAM_007060___opuE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1492
# Identity: 1181/1492 (79.2%)
# Similarity: 1181/1492 (79.2%)
# Gaps: 26/1492 ( 1.7%)
# Score: 4668.0
#
#
#=======================================
BSNT_01145___ 1 GTGAGTATTGAAATTATTATATCTTTAGGAATTTACTTTATTGCCATGCT 50
||||||||||||.|.|||||||||.|.||.|||||||||..|||||||||
RBAM_007060__ 1 GTGAGTATTGAACTAATTATATCTCTTGGCATTTACTTTGCTGCCATGCT 50
BSNT_01145___ 51 GTTAATCGGCTGGTATGCATTCAAGAAAACCACTGACATCAATGATTACA 100
|||||||||||||||.|||||||.|||.||.||..|.||.||||||||||
RBAM_007060__ 51 GTTAATCGGCTGGTACGCATTCAGGAAGACAACGAATATTAATGATTACA 100
BSNT_01145___ 101 TGCTTGGAGGAAGAGGCCTCGGACCATTCGTTACTGCTTTGTCTGCCGGT 150
||||.||.||||||||.|||||.||.|||||.||.||..||||.||.|||
RBAM_007060__ 101 TGCTGGGCGGAAGAGGACTCGGCCCGTTCGTAACGGCGCTGTCCGCAGGT 150
BSNT_01145___ 151 GCGGCCGATATGAGCGGATGGATGCTGATGGGTGTTCCCGGCGCGATGTT 200
||||||||||||||||.|||||||||||||||.|||||||||||.|||||
RBAM_007060__ 151 GCGGCCGATATGAGCGCATGGATGCTGATGGGAGTTCCCGGCGCAATGTT 200
BSNT_01145___ 201 TGCGACAGGGCTGTCCACCTTATGGCTTGCTTTAGGTCTTACAATCGGGG 250
.||.||.|||.|.||.|||||||||||.||..|.|||.|.||.|||||.|
RBAM_007060__ 201 CGCAACGGGGTTATCGACCTTATGGCTGGCGCTCGGTTTGACGATCGGCG 250
BSNT_01145___ 251 CGTACTCAAATTACTTGCTGCTGGCTCCAAGGCTGCGTGCTTATACAGAA 300
||||.||||||||..|||||||.|||||.||||||||.|||||.||.|||
RBAM_007060__ 251 CGTATTCAAATTATCTGCTGCTTGCTCCGAGGCTGCGCGCTTACACGGAA 300
BSNT_01145___ 301 GCGGCGGATGATGCGATTACAATTCCTGATTTCTTTGATAAACGATTCCA 350
|..|||||||||||||||||.|||||.|||||.||.||||||||.||||.
RBAM_007060__ 301 GTTGCGGATGATGCGATTACGATTCCCGATTTTTTCGATAAACGGTTCCG 350
BSNT_01145___ 351 GCATTCTTCATCACTGCTGAAAATCGTATCTGCATTGATCATCATGATCT 400
.||.||.||||||.||||||||||.||.||.||..||||.||.|||||||
RBAM_007060__ 351 CCACTCGTCATCATTGCTGAAAATTGTTTCCGCCGTGATTATTATGATCT 400
BSNT_01145___ 401 TTTTCACATTATATACCTCTTCCGGTATGGTATCTGGCGGACGGCTGTTT 450
||||||||.|.||.||.||.|||||.||||||||.||.||..||.|.|||
RBAM_007060__ 401 TTTTCACACTGTACACATCGTCCGGGATGGTATCCGGAGGCAGGTTATTT 450
BSNT_01145___ 451 GAATCTGCTTTTGGTGCGGATTACAAATTAGGCCTGTTTCTGACCACCGC 500
|||||.||.||.||.||.||.||||||||.||..|||||.|.||..|||.
RBAM_007060__ 451 GAATCGGCATTCGGCGCCGACTACAAATTCGGTTTGTTTTTAACGGCCGG 500
BSNT_01145___ 501 AGTTGTCGTGTTATACACACTGTTTGGCGGTTTCCTTGCTGTCAGTCTGA 550
.|||||.|||.|.|||||.|||||||||||||||||.|||||||||||||
RBAM_007060__ 501 TGTTGTTGTGCTTTACACGCTGTTTGGCGGTTTCCTCGCTGTCAGTCTGA 550
BSNT_01145___ 551 CTGACTTCGTGCAGGGTGCGATCATGTTTGCAGCACTAGTGCTTGTGCCG 600
|||||||.||.|||||.||||||||||||||.|||.||||||||||||||
RBAM_007060__ 551 CTGACTTTGTACAGGGAGCGATCATGTTTGCGGCATTAGTGCTTGTGCCG 600
BSNT_01145___ 601 ATCGTTGCTTTTACCCATGTGGGCGGCGTTGCTCCGACTTTCCATGAAAT 650
|||||||||||||||||..|.||..|||||.|..||||..|..||...||
RBAM_007060__ 601 ATCGTTGCTTTTACCCAGCTCGGGAGCGTTTCAACGACGATTGATTCGAT 650
BSNT_01145___ 651 CGACGCTGTTAATCCACATTTATTGGATATTTTTAAAGGCGCGAGCGTCA 700
|.||||.|||||.||..|..||||||||||.|||||||||||||||||||
RBAM_007060__ 651 CAACGCCGTTAACCCGAAACTATTGGATATCTTTAAAGGCGCGAGCGTCA 700
BSNT_01145___ 701 TTAGCATTATTTCCTATTTAGCCTGGGGGTTGGGCTACTACGGCCAGCCT 750
|||||||||||||.|||||.||.|||||..|.|||||.||||||||||||
RBAM_007060__ 701 TTAGCATTATTTCTTATTTGGCATGGGGACTCGGCTATTACGGCCAGCCT 750
BSNT_01145___ 751 CATATCATCGTCCGATTTATGGCCATTAAAGACATTAAAGATTTAAAACC 800
|||||||||||.|||||||||||.||||||||..|.||||||||||||||
RBAM_007060__ 751 CATATCATCGTACGATTTATGGCGATTAAAGAAGTGAAAGATTTAAAACC 800
BSNT_01145___ 801 TGCACGCCGAATCGGTATGAGCTGGATGATCATTACAGTTCTAGGTTCCG 850
.||.|||.|||||||.||||||||||||..||||.|||||.|.|||||..
RBAM_007060__ 801 CGCCCGCAGAATCGGGATGAGCTGGATGGCCATTTCAGTTGTCGGTTCAT 850
BSNT_01145___ 851 TGCTGA-CGGGTTTAATCGGTGTTGCATACGCCCATAAATTCGGAGTTGC 899
||||.| ||||.|| |||||.|||||.||..|.|||.|.||||||||..|
RBAM_007060__ 851 TGCTTACCGGGATT-ATCGGGGTTGCGTATTCTCATCACTTCGGAGTCTC 899
BSNT_01145___ 900 TGTAAAAGATCCGGAGATGATTTTCATTATCTTCTCTAAAATTTTGTTCC 949
.||||||||.|||||.|.||||||||||||.||.||||||||.|||||||
RBAM_007060__ 900 CGTAAAAGACCCGGAAACGATTTTCATTATTTTTTCTAAAATCTTGTTCC 949
BSNT_01145___ 950 ACCCATTAATTACAGGGTTCTTATTGTCAGCTATTTTGGCTGCCATCATG 999
||||..|.|||||.||.|||||..||||.||.|||||.||.||.||||||
RBAM_007060__ 950 ACCCGCTGATTACGGGCTTCTTGCTGTCCGCGATTTTAGCGGCGATCATG 999
BSNT_01145___ 1000 AGTTCGATTTCCTCACAGCTCTTAGTCACAGCAAGTGCTGTAACAGAGGA 1049
|||||.||||||||||||||..|.||.||.|||||.||..|.||.||.||
RBAM_007060__ 1000 AGTTCCATTTCCTCACAGCTTCTCGTAACGGCAAGCGCCATTACGGAAGA 1049
BSNT_01145___ 1050 TTTATACCGGTCATTTTTCAGACGAAAAGCTTCTGATAAAGAATTGGTCA 1099
|||||||||..|.|||||||||||..||||....|||||||||||.||||
RBAM_007060__ 1050 TTTATACCGCGCTTTTTTCAGACGGGAAGCGAGCGATAAAGAATTAGTCA 1099
BSNT_01145___ 1100 TGATCGGGCGATTGTCCGTCTTAGTCATTGCCGTTATCGCGGTACT-CTT 1148
|||.|||.||..||||.||.||..||.|.|||||||||||..|.|| |||
RBAM_007060__ 1100 TGACCGGACGCCTGTCGGTATTGATCGTGGCCGTTATCGCCATCCTGCTT 1149
BSNT_01145___ 1149 GTCATTGAATCCGAACAGCACCATTCTTGATTTGGTCGGATACGCTTGGG 1198
||..||||||||||||||||||||||||||.||||||||||.||.||||
RBAM_007060__ 1150 -TCCATGAATCCGAACAGCACCATTCTTGATCTGGTCGGATATGCGTGGG 1198
BSNT_01145___ 1199 CCGGCTTCGGTTCAGCTTTCGGACCTGCGATTCTGCTCAGTCTGTATTGG 1248
|.||.||||||||.|||.||||.||.|||.|..|||||||||||||.|||
RBAM_007060__ 1199 CAGGTTTCGGTTCGGCTATCGGCCCGGCGCTCTTGCTCAGTCTGTACTGG 1248
BSNT_01145___ 1249 AAACGAATGAACGAATGGGGCGCGCTTGCTGCCATGATTGTCGGGGCTGC 1298
|||||.|||||.||||||||.||||||||.||.||||||..||||||.||
RBAM_007060__ 1249 AAACGGATGAATGAATGGGGAGCGCTTGCGGCGATGATTACCGGGGCCGC 1298
BSNT_01145___ 1299 GACCGTGTTGATCTGGATTACAACCGGCCTGGCAAAATCAACCGGTGTGT 1348
|.||||.||.||||||||.||.||.||.||.||....||||||||.||.|
RBAM_007060__ 1299 GGCCGTTTTAATCTGGATCACGACAGGGCTTGCCGCTTCAACCGGCGTAT 1348
BSNT_01145___ 1349 ACGAAATCATCCCTGGGTTTATTCTCAGTATGATTGCCGGCATCATTGTC 1398
||||||||||.||.|||||..|.||||||.||||||||||.||....|||
RBAM_007060__ 1349 ACGAAATCATTCCGGGGTTCTTCCTCAGTCTGATTGCCGGTATTGCCGTC 1398
BSNT_01145___ 1399 AGCATGATCACAAAACGTCCTGCAAAAGCCTCTTA----CCGATTATTCG 1444
|||.||.|.||.|||...||.||..|.||.||||| |.|.|.|..||
RBAM_007060__ 1399 AGCCTGCTGACCAAAAAACCGGCCGATGCTTCTTATCAGCTGTTCAGCCG 1448
BSNT_01145___ 1445 GTGTCATGGAAAAGCTGTT----AAAACGCAAAAAGTAA--- 1479
| |||| |||||.|| ||||| |||.||
RBAM_007060__ 1449 G----ATGG--AAGCTCTTTTGAAAAAC-----AAGAAATAG 1479
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