Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01151 and RBAM_007120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01151___yerQ.1.9828.seq
# -bsequence dna-align/RBAM_007120___yerQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01151___yerQ-RBAM_007120___yerQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01151___yerQ-RBAM_007120___yerQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01151___yerQ
# 2: RBAM_007120___yerQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity: 810/912 (88.8%)
# Similarity: 810/912 (88.8%)
# Gaps: 0/912 ( 0.0%)
# Score: 3642.0
#
#
#=======================================
BSNT_01151___ 1 ATGAAACGTGCACGCATAATATACAATCCGACTTCAGGACGGGAGATCTT 50
|||||||||||||||||||||||||||||||||||||||||||||.|.||
RBAM_007120__ 1 ATGAAACGTGCACGCATAATATACAATCCGACTTCAGGACGGGAGCTTTT 50
BSNT_01151___ 51 TAAAAAGCATCTTGCCCAGGTCCTGCAAAAATTTGAACAAGCCGGCTATG 100
|||.||..|||||||||||||||||||||||||||||||||||||.||||
RBAM_007120__ 51 TAAGAAAAATCTTGCCCAGGTCCTGCAAAAATTTGAACAAGCCGGTTATG 100
BSNT_01151___ 101 AAACCTCCACCCATGCGACGACATGCGCAGGAGACGCTACACACGCTGCC 150
||||||||||||||||.||.||||||||.||.||.||.||.|||||.||.
RBAM_007120__ 101 AAACCTCCACCCATGCCACCACATGCGCGGGGGATGCCACCCACGCCGCA 150
BSNT_01151___ 151 AAGGAAGCGGCATTGCGTGAGTTTGACCTGATCATTGCGGCAGGCGGAGA 200
|..|||||.||.|||||.||||||||||||||.||.||.||.||||||||
RBAM_007120__ 151 ACAGAAGCCGCTTTGCGGGAGTTTGACCTGATTATCGCAGCCGGCGGAGA 200
BSNT_01151___ 201 CGGAACGATTAATGAGGTCGTCAACGGGCTTGCGCCTTTAGACAACCGTC 250
|||||||||||||||.|||||||||||.||.|||||.||||||||.||.|
RBAM_007120__ 201 CGGAACGATTAATGAAGTCGTCAACGGCCTCGCGCCGTTAGACAAACGCC 250
BSNT_01151___ 251 CGACACTCGGTGTGATTCCAGTCGGCACAACAAACGACTTCGCCAGAGCG 300
||||||||||..|.|||||.||||||||.|||||.|||||||||||||||
RBAM_007120__ 251 CGACACTCGGCATCATTCCGGTCGGCACGACAAATGACTTCGCCAGAGCG 300
BSNT_01151___ 301 CTCGGAATCCCACGCGAGGATATTTTAAAAGCGGCAGATACGGTCATTAA 350
||.||.||.||..|.|||.||||..|.||.||.||.|||||.||||||||
RBAM_007120__ 301 CTGGGCATTCCGAGAGAGAATATACTGAATGCCGCTGATACCGTCATTAA 350
BSNT_01151___ 351 CGGCGTTGCCCGCCCGATCGATATCGGACAGGTCAACGGCCAGTATTTTA 400
||||||.||||||||||||||.|||||||||||.|||||.||||||||||
RBAM_007120__ 351 CGGCGTAGCCCGCCCGATCGACATCGGACAGGTGAACGGTCAGTATTTTA 400
BSNT_01151___ 401 TCAATATCGCCGGAGGAGGCCGTCTGACGGAGCTGACGTACGACGTGCCA 450
||||.||||||||.||||||||||||||||||||||||||.||.||||||
RBAM_007120__ 401 TCAACATCGCCGGCGGAGGCCGTCTGACGGAGCTGACGTATGATGTGCCA 450
BSNT_01151___ 451 AGCAAACTCAAAACAATGCTCGGCCAGCTTGCTTATTATTTAAAAGGAAT 500
||||||||.|||||.|||||||||||||||||||||||||||||.|||||
RBAM_007120__ 451 AGCAAACTGAAAACGATGCTCGGCCAGCTTGCTTATTATTTAAAGGGAAT 500
BSNT_01151___ 501 GGAAATGCTGCCTTCACTTCGTCCGACAGAAGTCGAGATTGAATATGACG 550
|||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_007120__ 501 GGAAATGCTGCCTTCACTTCGACCGACAGAAGTCGAGATTGAATATGACG 550
BSNT_01151___ 551 GCAAGCTGTTTCAAGGTGAAATCATGCTGTTTTTGGTCACGCTGACAAAC 600
||||||||||||||||.|||||.|||||||||||.||.||||||||.|||
RBAM_007120__ 551 GCAAGCTGTTTCAAGGCGAAATTATGCTGTTTTTAGTGACGCTGACCAAC 600
BSNT_01151___ 601 TCCGTCGGCGGGTTTGAAAAGCTCGCGCCGGATTCCAGCCTGAATGACGG 650
||.||||||||.||.||.|||||.||.||.||||||||||||||||||||
RBAM_007120__ 601 TCGGTCGGCGGATTCGAGAAGCTGGCCCCTGATTCCAGCCTGAATGACGG 650
BSNT_01151___ 651 CATGTTTGATTTGATGATATTAAAGAAAGCAAACCTTGCTGAATTTATCA 700
|||||||||||||||.||.||.||.|||||.||.||.||.||.|||||||
RBAM_007120__ 651 CATGTTTGATTTGATTATTTTGAAAAAAGCCAATCTCGCGGAGTTTATCA 700
BSNT_01151___ 701 GGGTCGCTACGATGGCGCTTCGCGGCGAACATATCAACGACCAGCACATT 750
|.|||||.|..||||||||..|.|||||.|||||.|||||.|||||||||
RBAM_007120__ 701 GAGTCGCGAGCATGGCGCTCAGAGGCGATCATATTAACGATCAGCACATT 750
BSNT_01151___ 751 ATTTATACAAAAGCGAACCGCGTGAAAGTCAATGTATCAGAAAAGATGCA 800
|||||.||||||||||||||.|||||||||||||||||||||||||||||
RBAM_007120__ 751 ATTTACACAAAAGCGAACCGTGTGAAAGTCAATGTATCAGAAAAGATGCA 800
BSNT_01151___ 801 GCTGAACCTGGACGGCGAGTACGGCGGCATGCTGCCGGGCGAATTCGTGA 850
||||||||||||||||||.|||||||||||||||||||||||||||||||
RBAM_007120__ 801 GCTGAACCTGGACGGCGAATACGGCGGCATGCTGCCGGGCGAATTCGTGA 850
BSNT_01151___ 851 ATCTGTATCGACACATTCACGTCGTCATGCCGAAGGAGAAAGCGGAACAG 900
|.|||||.||.||.|||||||||.||||||||||||||||||||||||||
RBAM_007120__ 851 ACCTGTACCGGCATATTCACGTCATCATGCCGAAGGAGAAAGCGGAACAG 900
BSNT_01151___ 901 CTGGATGACTAA 912
||||||||.|||
RBAM_007120__ 901 CTGGATGATTAA 912
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