Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01225 and RBAM_007310

See Amino acid alignment / Visit BSNT_01225 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence dna-align/BSNT_01225___yetH.1.9828.seq
#    -bsequence dna-align/RBAM_007310___yetH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01225___yetH-RBAM_007310___yetH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01225___yetH-RBAM_007310___yetH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01225___yetH
# 2: RBAM_007310___yetH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity:     262/366 (71.6%)
# Similarity:   262/366 (71.6%)
# Gaps:           3/366 ( 0.8%)
# Score: 906.0
# 
#
#=======================================

BSNT_01225___      1 ---ATGATCAAACAAATTGGCACTGTTGCTGTATATGTCGAGGACCAGCA     47
                        |||||||||.||||.|..||.||.||.|||||....||.||.|||||
RBAM_007310__      1 ATGATGATCAAAAAAATCGCGACAGTCGCCGTATACACTGATGATCAGCA     50

BSNT_01225___     48 GAAAGCGAAGCAATTTTGGACAGAGAAGGTAGGCTTTGATATTGCAGCGG     97
                     .||||||||...|||.|||||.||.||.|..||.|||||.|..|..||.|
RBAM_007310__     51 AAAAGCGAAAACATTCTGGACGGAAAAAGCGGGGTTTGAAACCGTCGCCG    100

BSNT_01225___     98 ACCACCCAATGGGACCTGAAGCAAGCTGGCTGGAGGTTGCGCCAAAAGGA    147
                     |.||.||.|||||.||.|..||...||||||.|||||.|||||.|||||.
RBAM_007310__    101 AGCATCCGATGGGCCCGGGCGCCTTCTGGCTTGAGGTAGCGCCCAAAGGG    150

BSNT_01225___    148 GCCGAGACTCGTTTAGTCATTTACCCGAAAGCCATGATGAAAGGCTCAGA    197
                     |||...||||.|||.||.|||||.||||||.|.|||||||||||..|.||
RBAM_007310__    151 GCCACCACTCATTTGGTTATTTATCCGAAATCGATGATGAAAGGGGCCGA    200

BSNT_01225___    198 GCAAATGAAGGCTTCTATTGTGTTTGAATGCGAAGACATCTTTGGTACAT    247
                     |||.||||||||||||||.||.|||||.||.|||||..||||||...|||
RBAM_007310__    201 GCATATGAAGGCTTCTATCGTATTTGAGTGTGAAGATGTCTTTGCCGCAT    250

BSNT_01225___    248 ACGAGAAAATGAAGACAAACGGTGTAGAATTTCTCGGTGAGCCCAATCAA    297
                     ||||..|.|||||.|..|||||..|....|||.|.|.|||.||.||.|||
RBAM_007310__    251 ACGAACAGATGAAAAAGAACGGCATCACCTTTTTAGATGAACCGAAACAA    300

BSNT_01225___    298 ATGGAGTGGGGCACCTTCGTTCAATTTAAGGACGAAGACGGAAATGTGTT    347
                     |||||.|||||||.||||||.||||||||.||.||.||.||..||||.||
RBAM_007310__    301 ATGGAATGGGGCAGCTTCGTGCAATTTAAAGATGAGGATGGTCATGTCTT    350

BSNT_01225___    348 TTTATTAAAAGAATAA    363
                     |.|..|.|||...|||
RBAM_007310__    351 TCTCCTGAAATCGTAA    366


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