Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01227 and RBAM_007320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence dna-align/BSNT_01227.1.9828.seq
# -bsequence dna-align/RBAM_007320___yetI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01227-RBAM_007320___yetI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01227-RBAM_007320___yetI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01227
# 2: RBAM_007320___yetI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 911
# Identity: 632/911 (69.4%)
# Similarity: 632/911 (69.4%)
# Gaps: 64/911 ( 7.0%)
# Score: 2068.0
#
#
#=======================================
BSNT_01227 1 ------------------GTGAATATCGATCAATTATTATATCAATATAT 32
|||||.|..||.||||||.|..||.|.|||||
RBAM_007320__ 1 TTGAAAGAGGAGACGGCAGTGAACAAAGACCAATTACTTCATGATTATAT 50
BSNT_01227 33 CATAGACAACA--CTGCGGATATTACTGAGAAATGGTTCAGTTTGCGTTG 80
.|| .|| ||| |.||.||..|.||.||.||||||.|||...||.|..|
RBAM_007320__ 51 TAT-TAC-ACATTCGGCAGAGCTGACGGAAAAATGGCTCAAGCTGAGACG 98
BSNT_01227 81 CCAGCTAAAAGGCGAGC---TATATTCCGCCAGCCATTTAAGTGAAGAAA 127
..||||.|.||| || |.|||||.||....||.||||||||.||||
RBAM_007320__ 99 GAAGCTGAGAGG---GCGTTTTTATTCTGCGGATCAATTAAGTGAGGAAA 145
BSNT_01227 128 CGAAAACA-CTTTTAACCGAGCAGCATACATTTACCAATATAACA----- 171
.| ||||| ||..|.|.||||||||||||.||||| .||||
RBAM_007320__ 146 TG-AAACAGCTGCTGATCGAGCAGCATACCTTTAC-----AAACACGGTC 189
BSNT_01227 172 ATCGCAAGCGCATTTCTGGAGGATCAAACCGATTTTCAAGACAAC-ATGA 220
|||||||||||.|||.||||.||||...|||.||||||..|.||| |.||
RBAM_007320__ 190 ATCGCAAGCGCTTTTTTGGAAGATCCGGCCGTTTTTCAGCATAACAAAGA 239
BSNT_01227 221 CAAAATGGGCGGAAAACGTTGCGAAAAACAGGGTAGAGCAGGATGTTCAA 270
|||||||||.|.|.|.||.|||||||.|||.||.|||||.||.|...|.
RBAM_007320__ 240 -AAAATGGGCCGCACAGGTAGCGAAAAGCAGAGTGGAGCAAGACGCGGAG 288
BSNT_01227 271 GTTCATGAGGTCGTAGAAGCCATATCCAACTCTAGAATC-TCATTCTGGG 319
||||||||||||||.||.||.||...|||.||.||||.| || ||.||||
RBAM_007320__ 289 GTTCATGAGGTCGTTGAGGCGATCGGCAATTCAAGAACCGTC-TTTTGGG 337
BSNT_01227 320 ACGCAGT----CGTCACATTTATAAAAGAGAATCAGGAGATCGTGACAAA 365
|.||.|| ||| |||||..|.|||.|||||||.|||||.|||||
RBAM_007320__ 338 AGGCGGTCACCCGT----TTTATGGATGAGCATCAGGACATCGTAACAAA 383
BSNT_01227 366 TGAGGATGCAGACCGATGGAACCGCATTGTGAATCAG-TCGTTCGATAAG 414
.||||||||...|||.|||||.|.|.||||.|| |.| |||||.|||.||
RBAM_007320__ 384 CGAGGATGCCCGCCGCTGGAATCACCTTGTCAA-CGGCTCGTTTGATCAG 432
BSNT_01227 415 CTGATTATTGAATTCTCTGAGCAGTACCAAAAATTCATGCTGATGAGGCT 464
|||||.|..||.||..||||.||||..||.|||||.|||.|...||||||
RBAM_007320__ 433 CTGATGACGGATTTTACTGAACAGTTTCAGAAATTAATGATCGCGAGGCT 482
BSNT_01227 465 CACATCTCAGCAGGAACTGATCTCAGAGCTTG-GCTGCCCGGTCATTTCC 513
..|||||||||||||.||.||.||.|| .||| ||||.|||||.||||..
RBAM_007320__ 483 GTCATCTCAGCAGGAGCTTATTTCCGA-ATTGAGCTGTCCGGTTATTTTG 531
BSNT_01227 514 ATTGCCGATGGAATCGGGATATTGCCGCTTATCGGCTCCATTGATACAAA 563
||.||.|||...|||||.|...|||||||.||||||||.||||||||.|.
RBAM_007320__ 532 ATCGCGGATACGATCGGCACTCTGCCGCTCATCGGCTCGATTGATACGAG 581
BSNT_01227 564 ACGGGCACAGGTCATTTTAGAAACAGTGCCGGTCCGCTGTGTCGAGAGAA 613
||||||||..||.|||||.||..|.|||||||....||||||||..|.|.
RBAM_007320__ 582 ACGGGCACGCGTGATTTTGGAGTCGGTGCCGGAAAACTGTGTCGCCAAAC 631
BSNT_01227 614 AAATCACAAGCCTCGTCGTTGATCTTTCGGGTGTTCCGATTGTGGATACC 663
..|||||||..||.||..|||||||.||.|||||.||.|||||.|||||.
RBAM_007320__ 632 GGATCACAAATCTTGTGATTGATCTGTCCGGTGTGCCCATTGTCGATACG 681
BSNT_01227 664 ATGGTGGCTCAGCAATTGTACAACCTGTCTAAAACGCT-TTTCTTATTAG 712
||||||||.|||||||||||.|..|||||.||||||.| |||| |..|.|
RBAM_007320__ 682 ATGGTGGCGCAGCAATTGTATATGCTGTCGAAAACGTTATTTC-TCCTCG 730
BSNT_01227 713 GCGTCAAAGCCGTATTTTCAGGGATTCGCCCGGATGTGGCCCAAACATCG 762
||.|||.|.||||.|||||.||.|||||.||.||||||||.||.||.||.
RBAM_007320__ 731 GCATCAGAACCGTGTTTTCCGGCATTCGGCCTGATGTGGCACAGACTTCT 780
BSNT_01227 763 ATTCAATTGGGGCTTGATTTTAGTGAATATGAAACGTACGGCACGCTGAA 812
||.||||||||||||||||||...||.|||.||||.||||||.|.|||.|
RBAM_007320__ 781 ATCCAATTGGGGCTTGATTTTTCAGAGTATCAAACCTACGGCTCCCTGGA 830
BSNT_01227 813 GCAGGCATTAGAAAATATGGGTGTCCGCTGTATTGTTGAGGAATTGGAAG 862
||||||..|.|..|..|||||.|||...|||.||.|.|| |||||
RBAM_007320__ 831 GCAGGCGCTCGCCAGCATGGGCGTCACATGTGTTTTCGA------GGAAG 874
BSNT_01227 863 AAAACAAATAG 873
.|||...||||
RBAM_007320__ 875 CAAAAGCATAG 885
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