Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01235 and RBAM_007380
See
Amino acid alignment /
Visit
BSNT_01235 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence dna-align/BSNT_01235___yetN.1.9828.seq
# -bsequence dna-align/RBAM_007380___yetN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01235___yetN-RBAM_007380___yetN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01235___yetN-RBAM_007380___yetN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01235___yetN
# 2: RBAM_007380___yetN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1086
# Identity: 912/1086 (84.0%)
# Similarity: 912/1086 (84.0%)
# Gaps: 27/1086 ( 2.5%)
# Score: 3886.0
#
#
#=======================================
BSNT_01235___ 1 ATGGATTTTGAAATTCGGTTTTTATCCTTTTATGTCATACAGGTGGAAGG 50
||||||||||||||...|||||||||.|||||||||||.||.||||||||
RBAM_007380__ 1 ATGGATTTTGAAATCAAGTTTTTATCGTTTTATGTCATTCAAGTGGAAGG 50
BSNT_01235___ 51 CAAAGATGAGCAGGCGAACAAGCAGTTCAAGCACTTCCAGACCCTTGATA 100
.|||||.||.|||||.|||||.||||||||.||.||||||||||||||.|
RBAM_007380__ 51 AAAAGACGAACAGGCAAACAAACAGTTCAAACATTTCCAGACCCTTGACA 100
BSNT_01235___ 101 CGGGCGAATTTGAAGAAAGCGAGCTGAAGGACTTTCTCGACGGGGAACTG 150
|||..||||||||||||||||||||||||||.|||||.|||||||||.||
RBAM_007380__ 101 CGGAAGAATTTGAAGAAAGCGAGCTGAAGGATTTTCTAGACGGGGAATTG 150
BSNT_01235___ 151 AAAAAAATCGTCAAACGGAAAGCCGACCGCCATCCGCAGTCCGAGCAGGT 200
||.|||||||||||||||||||||||.||.||||||||.||||||||.||
RBAM_007380__ 151 AAGAAAATCGTCAAACGGAAAGCCGAACGGCATCCGCAATCCGAGCAAGT 200
BSNT_01235___ 201 CCCGACGAAAATCGGCCATTTTATCGTCGAGCCCGGCCACGAGCTCGATT 250
|||.||.||||||||||||||||||...|||||.|||||.|||||.||||
RBAM_007380__ 201 CCCAACAAAAATCGGCCATTTTATCACGGAGCCGGGCCATGAGCTTGATT 250
BSNT_01235___ 251 CCAACCCAAACTACAACATGTTCAACCGCGCGCGTCTGGCGGAAACAAAA 300
|.||.||.||.||||||.|.|||||||||||..|.||.|||||.||.||.
RBAM_007380__ 251 CAAATCCGAATTACAACCTTTTCAACCGCGCCAGACTTGCGGATACGAAG 300
BSNT_01235___ 301 GAAGACTTCAATG-AGCTGAGTGAGCAGTTCGTCCGCACGTACCTCGACA 349
||||..||.|..| ||| .||.|||||.|||||||||||.|||||.||||
RBAM_007380__ 301 GAAGCATTTATCGAAGC-AAGCGAGCAATTCGTCCGCACTTACCTTGACA 349
BSNT_01235___ 350 CAAGCGCGGTTCGCGGCGGCGTGTTTCTCGTCGCTTCGGCCGTGCCGAGA 399
|.||.||.||.||||||||.||.|||.||||.||.||||||||.|||.|.
RBAM_007380__ 350 CGAGTGCCGTGCGCGGCGGTGTTTTTATCGTGGCATCGGCCGTTCCGCGC 399
BSNT_01235___ 400 AAATACTTTGACGAGTCATTTGTCTTCATTATGAAATGTGATTTTGAGCC 449
||.||.|||||.||...|||.|||||.||.||||||||.|||||.|||||
RBAM_007380__ 400 AAGTATTTTGAAGACAAATTCGTCTTTATGATGAAATGCGATTTCGAGCC 449
BSNT_01235___ 450 GAAGGTCGCCCGCATCTCTGACGCGTCTTCTCTCATTAAAAAAGTCGAAA 499
||||||||||||||||||.|||||.||.||||||||||||||.|||||||
RBAM_007380__ 450 GAAGGTCGCCCGCATCTCAGACGCCTCGTCTCTCATTAAAAAGGTCGAAA 499
BSNT_01235___ 500 TGGCGATCACGACAAAAAACATGAAAAGCATCCAATACCCGTACATGCCA 549
||||.||||||||||||||||||||||||||.|||||.|||||.|||||.
RBAM_007380__ 500 TGGCCATCACGACAAAAAACATGAAAAGCATTCAATATCCGTATATGCCG 549
BSNT_01235___ 550 GAGGAAGGAATGGTCGA-GGAAG---GTGAGCTGAAAATCCACCAGGCTT 595
||.|||||.|| || ||||| .|||||||||||||||||||||.|
RBAM_007380__ 550 GAAGAAGGCAT----GACGGAAGAGCATGAGCTGAAAATCCACCAGGCCT 595
BSNT_01235___ 596 CGCACGCCCGCTATTTTGAGGACTTTCTGAAATTCGTCGAGTACGGAGAA 645
||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||
RBAM_007380__ 596 CGCACGCCCGTTATTTCGAAGATTTTCTCAAATTTGTCGAATACGGCGAA 645
BSNT_01235___ 646 TCGATGCCGGAAATCATGAAAAATCAGGTCATGAACATGGTACAGGAGCA 695
|||||||||||||||||||||||.||.||||||||||||||.|||||.||
RBAM_007380__ 646 TCGATGCCGGAAATCATGAAAAACCAAGTCATGAACATGGTGCAGGAACA 695
BSNT_01235___ 696 CGTCTACGAGACATTTGAAGACAACAGCGAAGAGCTCAAGCAGTTCGAGC 745
|||.||.||.||.||||||||.||||||||||||||..|||||||.||||
RBAM_007380__ 696 CGTGTATGAAACGTTTGAAGAAAACAGCGAAGAGCTTCAGCAGTTTGAGC 745
BSNT_01235___ 746 ACGACATTGAGATTTGGGAAGCAAGCGAAAAACGGGAAATCCAAGAGCGC 795
||||||||||.|||||||||||.||.|||||.||||||||.||.||||||
RBAM_007380__ 746 ACGACATTGAAATTTGGGAAGCGAGTGAAAAGCGGGAAATTCAGGAGCGC 795
BSNT_01235___ 796 CTCGACACCCATCAAGTCATCGAAGCCTCCGCCCAAATCATCGAGCACAC 845
||||||||.||||||||||||||.||.|||||.||.|||||.||.|||||
RBAM_007380__ 796 CTCGACACTCATCAAGTCATCGAGGCATCCGCGCAGATCATTGAACACAC 845
BSNT_01235___ 846 GCCAGAGGCCCAGCTGAAAATGAAAGTCGGAGAAACAGAGATTAAGGGAT 895
|||.||.|||.||||||||||||||||||||||||||||||||||.||||
RBAM_007380__ 846 GCCGGAAGCCGAGCTGAAAATGAAAGTCGGAGAAACAGAGATTAAAGGAT 895
BSNT_01235___ 896 TGCTAGCGGATTTTGGCGATTCTATTCATCTCGCAAAAGTAAACGGGCGC 945
|.||.||.|||||.|||||.||.||.||||||||||||||.|||||||||
RBAM_007380__ 896 TACTGGCTGATTTCGGCGAATCCATCCATCTCGCAAAAGTGAACGGGCGC 945
BSNT_01235___ 946 TATGTCGCGCTGATTGAAGCCGAGACGATTTCGTTTGAGAAAGGCAGTTC 995
|||||||||||.|||||.||.||||||||.||||||||.|||||||||||
RBAM_007380__ 946 TATGTCGCGCTCATTGAGGCGGAGACGATCTCGTTTGAAAAAGGCAGTTC 995
BSNT_01235___ 996 GCCGGTGGAGTTTTATAAGCCTGAGGGGCTGCATGAGGTGATTGAGCGGA 1045
|||||||||||||.|.|||||||||||||||||||||||||||||.||||
RBAM_007380__ 996 GCCGGTGGAGTTTCACAAGCCTGAGGGGCTGCATGAGGTGATTGAACGGA 1045
BSNT_01235___ 1046 TAAAAGGGAA-AAATATAAA------TGACGATTAA 1074
| |.|||| ||||.|.|| |||
RBAM_007380__ 1046 T---ACGGAATAAATCTGAACAAGACTGA------- 1071
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.