Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01769 and RBAM_007610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_01769___yhxD.1.9828.seq
# -bsequence dna-align/RBAM_007610___yhxD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01769___yhxD-RBAM_007610___yhxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01769___yhxD-RBAM_007610___yhxD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01769___yhxD
# 2: RBAM_007610___yhxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 919
# Identity: 694/919 (75.5%)
# Similarity: 694/919 (75.5%)
# Gaps: 38/919 ( 4.1%)
# Score: 2580.0
#
#
#=======================================
BSNT_01769___ 1 ATGTCTGATTCAAAT------------CTTACGAATCCTATAAAAGCATT 38
|||||||||.||||| ||.||||| ||.
RBAM_007610__ 1 ATGTCTGATGCAAATCTGCACAACCCGCTGACGAA------------ATA 38
BSNT_01769___ 39 TTTTCATGATGAATTTCCCGAACAATATCAAGAACCGCCAGGCCTGCA-A 87
|..|||||||||||||||..|||||||||||||||||||.||..|||| |
RBAM_007610__ 39 TGATCATGATGAATTTCCAAAACAATATCAAGAACCGCCCGGTTTGCAGA 88
BSNT_01769___ 88 AAGAACATGAAGCCTGTCCCTGATTGCGGAGAAAAAAGCTACAAAAGATC 137
||| |.|||||||||||.||.||||||||.||||.||||||.|||.||.|
RBAM_007610__ 89 AAG-AGATGAAGCCTGTGCCGGATTGCGGTGAAACAAGCTATAAAGGAGC 137
BSNT_01769___ 138 AGGTAAACTAACGGGTCGAAAAGCGCTTGTCACGGGCGGCGATTCCGGTA 187
.||.||.||.|.|||..|||||||.||.|||||.|||||||||||.||||
RBAM_007610__ 138 CGGCAAGCTGAAGGGAAGAAAAGCCCTCGTCACCGGCGGCGATTCAGGTA 187
BSNT_01769___ 188 TCGGCCGCGCTGCCGCAATTGCTTACGCCAGAGAAGGTGCCGATGTGGCC 237
|||||||.||.|||||.||||||||.|||.|.|||||.||.||||||||.
RBAM_007610__ 188 TCGGCCGGGCCGCCGCGATTGCTTATGCCCGGGAAGGGGCGGATGTGGCG 237
BSNT_01769___ 238 ATTAACTACTTGCCCGAGGAACAGCCAGATGCTGAAGAGGTAAAAGAACT 287
||||||||..||||.|||||||||||.|||||||||||.||.||||...|
RBAM_007610__ 238 ATTAACTATCTGCCTGAGGAACAGCCGGATGCTGAAGAAGTGAAAGCGTT 287
BSNT_01769___ 288 GATCGAAGCAGAAGGTCGAAAAGCAGTGCTGATCCCCGGAGACTTGAGCG 337
.||.|||..|||.||..|||||||.||.|||.|.||.|||||.||.||||
RBAM_007610__ 288 AATTGAAAAAGAGGGAAGAAAAGCCGTTCTGTTGCCGGGAGATTTAAGCG 337
BSNT_01769___ 338 ACGAATCCTTTTGCCAAGATCTGGTCAAACAGGCGCAGCAGGAGCTCGGA 387
|.|||.|.||||||..|||..|||...||.|.|||.|.||.|||||.||.
RBAM_007610__ 338 ATGAAGCGTTTTGCGGAGAATTGGCGGAAAAAGCGTATCAAGAGCTTGGC 387
BSNT_01769___ 388 GGACTTGATGTGCTAGCGCTCGTTGCAGGCAAACAGAAAGCAGTCGAAAA 437
||.|||||...|||.||.||.||.||.|||||||||.|.|||||.||..|
RBAM_007610__ 388 GGTCTTGACACGCTCGCTCTTGTCGCCGGCAAACAGCAGGCAGTGGATGA 437
BSNT_01769___ 438 CATCGAAGATC-TGCCTACTGAACAAATCTATAAAACATTTGAAGTGAAC 486
.|||...|||| |||| ||.||||||||||||.|||||||||||||.|||
RBAM_007610__ 438 TATCAGCGATCTTGCC-ACAGAACAAATCTATCAAACATTTGAAGTCAAC 486
BSNT_01769___ 487 GTCTTTTCCCTTTACTGGGTTGTAAAAGCGGCGCTTCCGTATTTGCCGGA 536
||.||.||.||.||.|||.|.||.|||||.||||||||||||.|||||||
RBAM_007610__ 487 GTATTCTCGCTGTATTGGCTCGTCAAAGCCGCGCTTCCGTATCTGCCGGA 536
BSNT_01769___ 537 GGGAGCTTCAATTATCACAACTACCTCAGTTGAAGGCTATAATCCAAGCC 586
.||.||.||.||||||||.||.||.||.||.|||||.|||||||||||||
RBAM_007610__ 537 AGGCGCGTCTATTATCACGACAACGTCCGTAGAAGGGTATAATCCAAGCC 586
BSNT_01769___ 587 CGATGCTGTTAGATTACGCAGCAACGAAAAACGCCATTATCGGCTTTACC 636
||||||||||.|||||.||.||.||||||.|.|||||||||||.|||||.
RBAM_007610__ 587 CGATGCTGTTGGATTATGCCGCGACGAAACATGCCATTATCGGTTTTACT 636
BSNT_01769___ 637 GTCGGACTGGGAAAACAGCTTGCTTCCAAAGGCATCAGAGTAAATTCAGT 686
|||||..|.|||||||||||.||....|||||.||||||||.||.||.||
RBAM_007610__ 637 GTCGGCTTAGGAAAACAGCTGGCGAATAAAGGAATCAGAGTCAACTCGGT 686
BSNT_01769___ 687 TGCGCCCGGACCAATTTGGACACCGCTGCAAATTTCCGGCGGACAGCCGA 736
.|||||.||.||.||.|||||.||.|||||.|||||.||.||.|||||
RBAM_007610__ 687 AGCGCCGGGGCCGATCTGGACGCCTCTGCAGATTTCGGGAGGGCAGCC-- 734
BSNT_01769___ 737 CG--GAAAACATCCCGAAATTCGGACAAGG-CACGCCGCCAGCCCCATTA 783
|| ||||||||.||||||||||| .|||| .||.|||.|.|..||||||
RBAM_007610__ 735 CGGTGAAAACATTCCGAAATTCGG-TAAGGAAACACCGGCCGTTCCATTA 783
BSNT_01769___ 784 ACTCGCGCTGGGCAGCCAGCGGAATTGGCTGATGTTTATGTATTTCTAGC 833
|..|||||.||.|||||.|||||..|.||.|...|||||||.|||.|.||
RBAM_007610__ 784 AAGCGCGCCGGACAGCCGGCGGAGCTAGCAGGGATTTATGTCTTTTTGGC 833
BSNT_01769___ 834 TTCAG-AGAATTCAAGCTATGTGACCTCTCAGGTATACGGAATCACCGGA 882
.|||| |||| ||.|||||||||||.||.||..|.|||.|..|.|.||||
RBAM_007610__ 834 CTCAGAAGAA-TCGAGCTATGTGACATCCCAAATTTACAGTGTAAGCGGA 882
BSNT_01769___ 883 GGAATTCCGACGGCATAG- 900
|||||||||||.||.| |
RBAM_007610__ 883 GGAATTCCGACAGCGT-GA 900
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