Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01265 and RBAM_007670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01265___yfmL.1.9828.seq
# -bsequence dna-align/RBAM_007670___yfml.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01265___yfmL-RBAM_007670___yfml.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01265___yfmL-RBAM_007670___yfml.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01265___yfmL
# 2: RBAM_007670___yfml
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1157
# Identity: 860/1157 (74.3%)
# Similarity: 860/1157 (74.3%)
# Gaps: 52/1157 ( 4.5%)
# Score: 3132.5
#
#
#=======================================
BSNT_01265___ 1 ATGACGCAAACTTGGCCATTTTTACATAATGCACAATCATTTATACAAGA 50
|||||.|||||.||||||||||||||..||.|||||.|||||||....||
RBAM_007670__ 1 ATGACCCAAACATGGCCATTTTTACAGCATACACAACCATTTATCGCCGA 50
BSNT_01265___ 51 GAA-TTGGAGTGCTTCCGGCTTTCAAACGCCAACCCCTGTTCAAGAGCAG 99
.|| |.|||| ||.||.||||||||...|||.|||....||||.||..|.
RBAM_007670__ 51 AAACTGGGAG-GCCTCAGGCTTTCAGGAGCCGACCGTCATTCAGGAAAAA 99
BSNT_01265___ 100 GCAGCCCAGCTGATCATGGACGGAAAGGATGTCATCGCGGAATCGCCGAC 149
||.||||||.||||.|||||.||.||.||.|||||.||.|||||.|||||
RBAM_007670__ 100 GCCGCCCAGGTGATTATGGAAGGGAAAGACGTCATTGCCGAATCCCCGAC 149
BSNT_01265___ 150 AGGCACAGGCAAGACGCTGGCGTATGCGCTGCCGGTCTTGGAGCGGATCA 199
.||.||.||.||.||..|||||||..||||.|||||..||||||||||||
RBAM_007670__ 150 GGGAACGGGAAAAACATTGGCGTACACGCTTCCGGTTCTGGAGCGGATCA 199
BSNT_01265___ 200 AACCAGAGCAAAAGCATCCGCAGGCGGTGATTTTAGCGCCTTCCCGTGAG 249
|.||.||.||.||.||||||||.|.|.|.|||||||||||.|||||.|||
RBAM_007670__ 200 ACCCGGAACAGAAACATCCGCAAGTGATCATTTTAGCGCCGTCCCGCGAG 249
BSNT_01265___ 250 CTGGTGATGCAGATTTTTCAGGTGATTCAGGATTGGAAAGCGGGCTCAGA 299
||.|||||||||||||||||.||||||||||||||||.|...|||||.||
RBAM_007670__ 250 CTTGTGATGCAGATTTTTCAAGTGATTCAGGATTGGATAAAAGGCTCCGA 299
BSNT_01265___ 300 GCTGCGCGCGGCTTCCTTAATCGGCGGGGCGAATGTGAAGAAGCAGGTCG 349
.||.|||||....||.||.|||||||||||.||.|||||.||||||||.|
RBAM_007670__ 300 TCTTCGCGCTTTGTCTTTGATCGGCGGGGCAAACGTGAAAAAGCAGGTGG 349
BSNT_01265___ 350 AAAAGCTGAAGAAACATCCGCATATCATCGTCGGCACGCCAGGCAGGGTA 399
|||||||.||.||..|.|||||||||||.|..|||||.||.||||||||.
RBAM_007670__ 350 AAAAGCTCAAAAATAAACCGCATATCATTGCGGGCACACCGGGCAGGGTG 399
BSNT_01265___ 400 TTTGAACTGATTAAAGCAAAGAAACTCAAAATGCATGAAGTGAAAACGAT 449
.|.|||.|||||.|.||.||.||.||.||||||||||||||.||.|||||
RBAM_007670__ 400 CTCGAATTGATTCAGGCGAAAAAGCTGAAAATGCATGAAGTCAAGACGAT 449
BSNT_01265___ 450 TGTACTTGATGAAGCGGATCAGCTTATCCTG---CCGGAGCATCGCGAGA 496
.||.||||||||||||||||||| ||.|| |.|||.||.|||||.|
RBAM_007670__ 450 CGTTCTTGATGAAGCGGATCAGC---TCGTGACACAGGAACACCGCGAAA 496
BSNT_01265___ 497 CGATCAAACAAATTATTAAAACGACATTAAGAGACCGCCAGCTTCTATGT 546
||||.|||.||||.|||||||||||..|.|.||||||.||||||.||.|.
RBAM_007670__ 497 CGATGAAAAAAATCATTAAAACGACGCTGAAAGACCGACAGCTTTTAAGC 546
BSNT_01265___ 547 TTTTCCGCGACACTCAAAAAGGAAACAGAGGATGTGCTCCGCGAAT---- 592
||||||||.||.||..|...|||||||||..|.||||| ||||
RBAM_007670__ 547 TTTTCCGCTACGCTGCAGCCGGAAACAGAACAGGTGCT----GAATACCA 592
BSNT_01265___ 593 TGGCGCAAGAGCCTGAGGTGTTGAAGGTACAGCGAAGCAAGGTGGA---- 638
|.||.||.||.||.|..||.||||| ||.||||| |||
RBAM_007670__ 593 TCGCACACGAACCGGCCGTTTTGAA-----AGTGAAGC-----GGAATAC 632
BSNT_01265___ 639 GGCAGGGAAA--------GTGAAACATCAATACCTGATTTGCGACCAGCG 680
||| ||||| ||.|..||||||||.||..|.|||||.|||||
RBAM_007670__ 633 GGC--GGAAAAAGCGCGCGTCACGCATCAATATCTCGTCTGCGATCAGCG 680
BSNT_01265___ 681 CGACAAAGTGAAGCTGCTGCAAAAGCTGTCAAGGCTTGAA-GGCATGCAG 729
.||.|||||.|||||..||||||||||||||.||| |||| |||||||||
RBAM_007670__ 681 GGATAAAGTAAAGCTATTGCAAAAGCTGTCACGGC-TGAACGGCATGCAG 729
BSNT_01265___ 730 GCACTCGTATTTGTGAGAGACATTGGCAACCTGAGTGTATATGCGGAAAA 779
||.|||||.||.||.|||||.||.||.||..|.||.||.|||||||||||
RBAM_007670__ 730 GCGCTCGTGTTCGTCAGAGATATCGGAAATTTAAGCGTCTATGCGGAAAA 779
BSNT_01265___ 780 ACTGGCATATCACCACGTTGAACTCGGCGTTTTGCACAGTGAAGCGAAAA 829
|||.||.||||||||.||.||.||||||.|..|||||.|.||||||||||
RBAM_007670__ 780 ACTCGCCTATCACCATGTGGATCTCGGCATCCTGCACGGAGAAGCGAAAA 829
BSNT_01265___ 830 AAATGGAGAGGGCAAAAATCATT-GCCGCATTCGAAGACGGAGAGTTTCC 878
||||||||.|||||||.|| ||| .|.||.||.|||...|||||.|||||
RBAM_007670__ 830 AAATGGAGCGGGCAAAGAT-ATTATCAGCGTTTGAACGGGGAGAATTTCC 878
BSNT_01265___ 879 TCTTTTATTGGCGACTGACATTGCCGCACGCGGTTTAGACATTGAAAACC 928
.||..|..||||||||||||||||.||.|||||..|.||.||.||..|.|
RBAM_007670__ 879 GCTGCTTCTGGCGACTGACATTGCGGCGCGCGGACTCGATATCGATGATC 928
BSNT_01265___ 929 TGCCATACGTGATTCATGCTGATATTCCTGATGAAGATGGCTATGTCCAC 978
|.||.|||||.|||||.||.||.||.||..||||||||||.||..|.|||
RBAM_007670__ 929 TTCCGTACGTCATTCACGCGGACATCCCGAATGAAGATGGGTACATTCAC 978
BSNT_01265___ 979 AGATCAGGACGAACAGGCCGGGCCGGAAAAGAAGGCAACGTGCTGAGCCT 1028
||||||||.||.||.||.||||||||.||||||||.|.|||.||.|||||
RBAM_007670__ 979 AGATCAGGCCGGACGGGGCGGGCCGGTAAAGAAGGAACCGTACTCAGCCT 1028
BSNT_01265___ 1029 TGTGACGAAATTGGAGGAATCTAAGCTGAAAAAAATGGCGAAGAAGCTTG 1078
|||.|||....||||.|||||.||..|||||||||||||.||....||.|
RBAM_007670__ 1029 TGTCACGCCGATGGAAGAATCCAAATTGAAAAAAATGGCCAAATCACTCG 1078
BSNT_01265___ 1079 GTGTTGAACTGAGTGAAGCTGTGTATGCAGGCGGAAAA----CTGAAGAC 1124
|..|||..||||..||.||.||.|||.||||||||||| ||||
RBAM_007670__ 1079 GAATTGCGCTGAAAGAGGCCGTTTATTCAGGCGGAAAATTATCTGA---- 1124
BSNT_01265___ 1125 GAAATAA 1131
|||||||
RBAM_007670__ 1125 GAAATAA 1131
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