Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01258 and RBAM_007910
See
Amino acid alignment /
Visit
BSNT_01258 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01258___yfmQ.1.9828.seq
# -bsequence dna-align/RBAM_007910___yfmQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01258___yfmQ-RBAM_007910___yfmQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01258___yfmQ-RBAM_007910___yfmQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01258___yfmQ
# 2: RBAM_007910___yfmQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 316/466 (67.8%)
# Similarity: 316/466 (67.8%)
# Gaps: 41/466 ( 8.8%)
# Score: 1012.5
#
#
#=======================================
BSNT_01258___ 1 ATGACATGGGCGATCG-TGATGT-----TAATTCTCATGAGTCTGGTGAA 44
.||||||| |||.| .|.||| ||.||.||||.||.|||.|.||
RBAM_007910__ 1 GTGACATG---GATTGCAGTTGTTTCAATAGTTGTCATAAGCCTGATTAA 47
BSNT_01258___ 45 AATCGTATTAACCTGTCTTCCTACAGGCGTCATAGAATGGCTGCTCGGCA 94
.||.||..|.||.||.||||||||.||.|...|.||||||.|.|||.|||
RBAM_007910__ 48 GATTGTGCTGACATGCCTTCCTACCGGAGCGGTGGAATGGATCCTCCGCA 97
BSNT_01258___ 95 AATTTGAAGTGCACGCCAAGCTTAGTG--GCGAAAATGCG----AGTCTC 138
|.||||||...||..|.|||||.|||| ||| |.|| .||.||
RBAM_007910__ 98 AGTTTGAAACCCATTCAAAGCTCAGTGACGCG----TCCGCTGCCGTTTC 143
BSNT_01258___ 139 TCTCTAGATGGAAAACGTCTCGAGGGTACAGAGAAGCAGAAA------GT 182
.||| |..|||||||||||.||.| |.|||| |.||| ||
RBAM_007910__ 144 CCTC--GGCGGAAAACGTCTGGAAG-----GCGAAG-ACAAACGCCGGGT 185
BSNT_01258___ 183 GATTGATCAATTTAACGAAGCTGTCTTCCTGGAGAAATATTATATCTATC 232
|||||||.|.|||||||||||.||.||..|.||.....|||||||.||.|
RBAM_007910__ 186 GATTGATGATTTTAACGAAGCCGTGTTTATCGAACGGCATTATATATACC 235
BSNT_01258___ 233 CAGGTGATGAAGAGCGTTATTTACATCCGGAAAATGGCGGCACGCCGCTG 282
||||.|||||||||||||||.|.||||||.||||.||.|.|...|||||.
RBAM_007910__ 236 CAGGGGATGAAGAGCGTTATCTTCATCCGCAAAACGGAGCCGATCCGCTT 285
BSNT_01258___ 283 GTGATAGATACAAAAAAAGGAAAAAAAGACGTGAAGCTGTTCGTGTACCG 332
||.||..|.||.|.|||||||||||||||.||||.|.||||.||.|||.|
RBAM_007910__ 286 GTCATTAAGACGAGAAAAGGAAAAAAAGATGTGACGGTGTTTGTATACAG 335
BSNT_01258___ 333 CTACGACGACCATATCGACGTCGTGAAACAGTACAAGAAGAAAGTGATCG 382
||||||.||.|||.|.||.|||||.||||||.|.||.||||||||..|||
RBAM_007910__ 336 CTACGAAGATCATGTAGATGTCGTCAAACAGCAGAAAAAGAAAGTCGTCG 385
BSNT_01258___ 383 CGTATCGAGTGCTTTCTGAAAGCCTTCAAAAAGAG-TCTCTGTCAGTGGC 431
|.|||..|||.|||||.||.|||||.| |||||.| |||.||.|.|..||
RBAM_007910__ 386 CTTATTCAGTTCTTTCCGACAGCCTGC-AAAAGCGCTCTATGGCCGCCGC 434
BSNT_01258___ 432 GGGAAGTTTAGCTTAA 447
.||.||.|.|
RBAM_007910__ 435 CGGGAGCTGA------ 444
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.