Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01352 and RBAM_008350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:03
# Commandline: needle
# -asequence dna-align/BSNT_01352___sspH.1.9828.seq
# -bsequence dna-align/RBAM_008350___sspH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01352___sspH-RBAM_008350___sspH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01352___sspH-RBAM_008350___sspH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01352___sspH
# 2: RBAM_008350___sspH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity: 128/190 (67.4%)
# Similarity: 128/190 (67.4%)
# Gaps: 17/190 ( 8.9%)
# Score: 404.5
#
#
#=======================================
BSNT_01352___ 1 ATGAATATTCAAAGGGCGAAAGAAATTGTAGAATCTCCCGATATGAAAAA 50
.||||||..||..|.||||||||.|||..||||||..|||..|||....|
RBAM_008350__ 1 GTGAATACACAGCGTGCGAAAGACATTTCAGAATCCGCCGCCATGGCGTA 50
BSNT_01352___ 51 AGTAACATACAACGGCGTTCCTATTTACATTCAGCACGTAAATGAAGAAA 100
.||.||.|||.|.||.|||||.|||||.||||||||.||.||.|||||.|
RBAM_008350__ 51 TGTGACGTACGAAGGAGTTCCGATTTATATTCAGCATGTCAACGAAGACA 100
BSNT_01352___ 101 CTGGAACAGCAAGAATTAATCCGCTTGACGAA--CCGCAAGAGGAGCATG 148
..|.||||||.||||||..||||.|.| ||| ||||||...|||||.|
RBAM_008350__ 101 AGGAAACAGCCAGAATTTTTCCGATCG--GAAATCCGCAATTTGAGCAGG 148
BSNT_01352___ 149 AAGTGCAG----CTGAACAGCTTAAAAGAGGATT----AA 180
||||||.| |||| .|||.|||||.||| |
RBAM_008350__ 149 AAGTGCTGCTTTCTGA----TTTACAAGAGCATTTTTGA- 183
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