Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01360 and RBAM_008360

See Amino acid alignment / Visit BSNT_01360 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence dna-align/BSNT_01360___malA.1.9828.seq
#    -bsequence dna-align/RBAM_008360___glvA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01360___malA-RBAM_008360___glvA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01360___malA-RBAM_008360___glvA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01360___malA
# 2: RBAM_008360___glvA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1354
# Identity:    1087/1354 (80.3%)
# Similarity:  1087/1354 (80.3%)
# Gaps:           8/1354 ( 0.6%)
# Score: 4319.0
# 
#
#=======================================

BSNT_01360___      1 ATGA-AGAAAAAATCATTCTCAATCGTAATAGCGGGCGGAGGGAGCACTT     49
                     |||| || |.|||||||||||||||||.||.||.|||||.||.|||||.|
RBAM_008360__      1 ATGACAG-ACAAATCATTCTCAATCGTTATTGCAGGCGGCGGCAGCACAT     49

BSNT_01360___     50 TCACTCCAGGGATCGTACTCATGCTCTTGGACCATTTGGAGGAGTTTCCG     99
                     |.||.||.||.||.|||.|.|||||.|||.|.||..||||.|||||||||
RBAM_008360__     50 TTACCCCCGGAATTGTATTAATGCTTTTGAATCACCTGGAAGAGTTTCCG     99

BSNT_01360___    100 ATCAGAAAGCTGAAGCTGTATGATAATGATAAGGAGAGACAGGATCGAAT    149
                     ||||||||||||||.||.|||||.||||||||.||.||.|||||.||.||
RBAM_008360__    100 ATCAGAAAGCTGAAACTTTATGACAATGATAAAGAAAGGCAGGAGCGGAT    149

BSNT_01360___    150 TGCAGGCGCCTGTGACGTTTTTATCAGAGAAAAAGCGCCGGATATGGAAT    199
                     |||.||.||.|||||.||.|||||.|.|||||||||||||||.||.||||
RBAM_008360__    150 TGCGGGTGCGTGTGAGGTATTTATAAAAGAAAAAGCGCCGGACATTGAAT    199

BSNT_01360___    200 TTGCAGCGAC-GACTGACCCGGAAGA-AGCTTTTACAGATGTCGATTTTG    247
                     ||...||||| || ||||||.| ||| .||||||||.|||||.||.||.|
RBAM_008360__    200 TTCTGGCGACTGA-TGACCCAG-AGACGGCTTTTACGGATGTTGACTTCG    247

BSNT_01360___    248 TTATGGCGCACATCAGAGTAGGGAAATACGCGATGCGTGCGCTTGATGAG    297
                     |.||||||||.|||.|.||.||.|||||.||||||||.|||||.|||||.
RBAM_008360__    248 TCATGGCGCATATCCGCGTCGGAAAATATGCGATGCGCGCGCTCGATGAA    297

BSNT_01360___    298 CAAATTCCGTTAAAGTACGGAGTTGTCGGCCAGGAGACGTGCGGGCCGGG    347
                     |||||.|||.|.||||||||.||.|||||||||||.||.|||||||||||
RBAM_008360__    298 CAAATCCCGCTGAAGTACGGCGTGGTCGGCCAGGAAACATGCGGGCCGGG    347

BSNT_01360___    348 CGGGATCGCATACGGTATGCGTTCGATCGGCGGTGTGCTTGAAATATTAG    397
                     |||.||||||||.||.|||||.||.|||||||||||.||.||.||..|.|
RBAM_008360__    348 CGGAATCGCATATGGCATGCGCTCTATCGGCGGTGTTCTGGAGATTCTTG    397

BSNT_01360___    398 ATTACATGGAAAAATACTCGCCTGATGCGTGGATGCTCAATTATTCCAAT    447
                     ||||.|||||||..||||||||.||.||.||||||.|.|||||.||||||
RBAM_008360__    398 ATTATATGGAAACGTACTCGCCCGACGCATGGATGTTGAATTACTCCAAT    447

BSNT_01360___    448 CCGGCGGCAATTGTGGCTGAAGCTACGAGACGCCTTAAACCGAATTCTAA    497
                     ||||||||.||||||||.||||||||..|.|||||.|.|||||||||.||
RBAM_008360__    448 CCGGCGGCGATTGTGGCCGAAGCTACACGGCGCCTCAGACCGAATTCAAA    497

BSNT_01360___    498 AATTCTCAATATCTGTGATATGCCGGTTGGGATCGAAGACCGGATGGCGC    547
                     |||..|.||.|||||.||.||||||||.||.||.||.||.||.||||||.
RBAM_008360__    498 AATATTGAACATCTGCGACATGCCGGTCGGAATTGAGGATCGCATGGCGA    547

BSNT_01360___    548 AAATTCTTGGCTTATCCTCAAGAAAAGAAATGAAGGTCCGCTATTACGGA    597
                     |.||.||.||.|||||.|||.|||||||||||||.|||||.||.|||||.
RBAM_008360__    548 ACATCCTCGGATTATCTTCACGAAAAGAAATGAACGTCCGTTACTACGGC    597

BSNT_01360___    598 TTAAATCACTTCGGCTGGTGGACATCAATTCA-GGATCAAGAGGGCAACG    646
                     ||.||.|||||.|||||||||||.||.| ||| .||.|...|.|||||.|
RBAM_008360__    598 TTGAACCACTTTGGCTGGTGGACGTCCA-TCACAGACCGGCATGGCAATG    646

BSNT_01360___    647 ATTTAATGCCGAAGCTGAAGGAGCATGTATCTCAATACGGCTATATTCCG    696
                     |||||||||||||||||||.||||||||...|.||||||||||..|||||
RBAM_008360__    647 ATTTAATGCCGAAGCTGAAAGAGCATGTCCGTGAATACGGCTACGTTCCG    696

BSNT_01360___    697 AAAACAGAGGCTGAAGCGGTGGAAGCGAGCTGGAATGACACATTCGCCAA    746
                     ||.||..||||.|||..|...|||||.||||||||||||||||||...||
RBAM_008360__    697 AAGACGAAGGCCGAACAGACTGAAGCAAGCTGGAATGACACATTCAAAAA    746

BSNT_01360___    747 AGCGCGTGACGTGCAGGCCGCAGATCCTGATACACTGCCGAATACGTATT    796
                     ||||||.|||||.|||||.||.|||||.|||||.||.|||||.||.|||.
RBAM_008360__    747 AGCGCGCGACGTACAGGCGGCTGATCCGGATACGCTTCCGAACACATATC    796

BSNT_01360___    797 TGCAATATTATTTGTTCCCGGATGATATGGTGAAAAAATCAAATCCGAAT    846
                     ||||||||||.||.|||||||||||||||||||||||||||||.|||||.
RBAM_008360__    797 TGCAATATTACTTATTCCCGGATGATATGGTGAAAAAATCAAACCCGAAC    846

BSNT_01360___    847 CATACGCGGGCAAATGAAGTGATGGAAGGGCGCGAAGCTTTTATTTTCAG    896
                     ||||||.|.||.||.|||||.|||||||||||.||||||||.||||||||
RBAM_008360__    847 CATACGAGAGCCAACGAAGTCATGGAAGGGCGGGAAGCTTTCATTTTCAG    896

BSNT_01360___    897 CCAATGTGACATGATTACACGTGAGCAGTCCACAGAAAACAGCGAAATCA    946
                     ||||||.||.||||||||.||.||.||.||..|.||.|||||.|||||.|
RBAM_008360__    897 CCAATGCGATATGATTACGCGCGAACAATCGTCGGAGAACAGTGAAATTA    946

BSNT_01360___    947 AAATCGATGACCACGCATCATATATCGTTGATCTTGCCCGGGCGATTGCC    996
                     ||||.|||||.||.||.||.||||||||.||.|||||||||||.||.||.
RBAM_008360__    947 AAATTGATGATCATGCTTCCTATATCGTCGACCTTGCCCGGGCCATCGCT    996

BSNT_01360___    997 TACAACACAGGTGAAAGAATGCTGTTGATCGTTGAAAATAACGGCGCAAT   1046
                     |||||||||||.||.||.||||||||.||||||||||||||||||||.||
RBAM_008360__    997 TACAACACAGGGGAGAGGATGCTGTTAATCGTTGAAAATAACGGCGCGAT   1046

BSNT_01360___   1047 TGCGAACTTTGACCCGACTGCGATGGTCGAGGTGCCATGCATTGTCGGCT   1096
                     .||.||||||||.|||.|.||.|||||.|||.|.||.||..|.||.||.|
RBAM_008360__   1047 CGCAAACTTTGATCCGTCAGCCATGGTTGAGATTCCTTGTCTCGTAGGTT   1096

BSNT_01360___   1097 CAAATGGGCCTGAACCGATTACCGTCGGCACCATTCCGCAATTCCAAAAA   1146
                     ||||.||.||.||||||.|..|.|||||.|.|||.||||||||.||||||
RBAM_008360__   1097 CAAACGGACCGGAACCGCTCTCAGTCGGGAACATACCGCAATTTCAAAAA   1146

BSNT_01360___   1147 GGGCTTATGGAGCAGCAGGTATCCGTTGAGAAGCTGACTGTTGAAGCGTG   1196
                     ||.||.|||||.||||||||.||.||.||.||.|||||.|.|||||||||
RBAM_008360__   1147 GGCCTGATGGAACAGCAGGTGTCTGTCGAAAAACTGACGGCTGAAGCGTG   1196

BSNT_01360___   1197 GGCGGAGAAATCGTTCCAAAAGCTGTGGCAGGCGCTAATTTTGTCAAAAA   1246
                     ||..|||...||.||.||||||||||||||||||||.||..|||||||||
RBAM_008360__   1197 GGAAGAGCGGTCATTTCAAAAGCTGTGGCAGGCGCTGATCCTGTCAAAAA   1246

BSNT_01360___   1247 CAGTGCCGAACGCGCGTGTGGCAAGACTCATTCTCGAGGATTTAATGGAG   1296
                     |||||||||||||.||||||||||||||.|||||.||.|||.|.||||||
RBAM_008360__   1247 CAGTGCCGAACGCTCGTGTGGCAAGACTGATTCTTGAAGATCTGATGGAG   1296

BSNT_01360___   1297 GCCAACAAAGACTTCTGGCCTGAGCTTGATCAAAGCCCGACCCGTATATC   1346
                     ||.||.||.||||.||||||||||||||||..|||.|||.|.|.|||.||
RBAM_008360__   1297 GCTAATAAGGACTACTGGCCTGAGCTTGATGTAAGTCCGTCTCCTATTTC   1346

BSNT_01360___   1347 ATAA   1350
                     .|.|
RBAM_008360__   1347 CTGA   1350


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