Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01362 and RBAM_008380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:04
# Commandline: needle
# -asequence dna-align/BSNT_01362___malP.1.9828.seq
# -bsequence dna-align/RBAM_008380___glvC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01362___malP-RBAM_008380___glvC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01362___malP-RBAM_008380___glvC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01362___malP
# 2: RBAM_008380___glvC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1603
# Identity: 1278/1603 (79.7%)
# Similarity: 1278/1603 (79.7%)
# Gaps: 35/1603 ( 2.2%)
# Score: 5100.0
#
#
#=======================================
BSNT_01362___ 1 ATGATGCAAAAAATTCAGCGCTTTGGAAGCGCGATGTTTGTGCCTGTTTT 50
||||||||||||.|.||||||||.||.|||||||||||||||||||||||
RBAM_008380__ 1 ATGATGCAAAAAGTCCAGCGCTTCGGCAGCGCGATGTTTGTGCCTGTTTT 50
BSNT_01362___ 51 ATTATTCGCGTTCGCCGGCATTATCGTCGGTATCAGCACGCTCTTTAAAA 100
||||||.||.||..||||.|||||.||||||.|.||.|||.|.|||||||
RBAM_008380__ 51 ATTATTTGCATTTTCCGGTATTATTGTCGGTCTGAGTACGTTGTTTAAAA 100
BSNT_01362___ 101 ATAAAACCCTCATGGGCCCGCTCGCCGATCCCGACGGTTTTTGGTATCAG 150
|||||||.||.|||||.|||||.||.|||||.|||||..||||||||||.
RBAM_008380__ 101 ATAAAACGCTGATGGGGCCGCTGGCTGATCCTGACGGGCTTTGGTATCAA 150
BSNT_01362___ 151 TGCTGGTATATTATTGAGCAGGGCGGCTGGACTGTTTTTAACCAAATGCC 200
||||||||..|.|||||.||||||||||||||.||.|||||.||||||||
RBAM_008380__ 151 TGCTGGTACGTCATTGAACAGGGCGGCTGGACCGTCTTTAATCAAATGCC 200
BSNT_01362___ 201 GCTCTTATTCGCCATCGGCATCCCGGTTGCTTTGGCGAAGAAAGCTCAGG 250
||||.|.||.||.||||||||.||.||.||.||.|||||.|||||.||||
RBAM_008380__ 201 GCTCCTGTTTGCGATCGGCATACCTGTCGCCTTAGCGAAAAAAGCGCAGG 250
BSNT_01362___ 251 CACGCGCTTGTTTGGAAGCGCTTACTGTTTACCTGACATTCAACTATTTT 300
|.||.||.|||||||||||||||||.|||||.|||||||||||.||.|||
RBAM_008380__ 251 CGCGGGCCTGTTTGGAAGCGCTTACAGTTTATCTGACATTCAATTACTTT 300
BSNT_01362___ 301 GTCAGCGCGATATTGACGGTATGGGGAGGAGCATTTGGCGTCGACATGAA 350
.|||..|||||..|||||||.|||||.||.||.|||...|||||.||||.
RBAM_008380__ 301 ATCAATGCGATTCTGACGGTTTGGGGCGGGGCTTTTCATGTCGATATGAC 350
BSNT_01362___ 351 CCAAGAGGTCGGCGGAACGAGCGGGTTAACGATGATTGCAGGCATAAAAA 400
.||.||.|.||||||||||||||||.|.||||||||.||.|||||.||||
RBAM_008380__ 351 TCAGGAAGCCGGCGGAACGAGCGGGCTGACGATGATCGCCGGCATCAAAA 400
BSNT_01362___ 401 CGCTCGATACCAACATTATCGGAGCCATCTTTATTTCTTCGATTGTCGTC 450
||||.|||||.||.||||||||.||||||||||||||.||.||||||||.
RBAM_008380__ 401 CGCTTGATACGAATATTATCGGCGCCATCTTTATTTCATCTATTGTCGTG 450
BSNT_01362___ 451 TTTTTGCATAACCGCTATTTTGATAAAAAACTGCCCGATTTTCTCGGCAT 500
|.||||||.||.||.||||||||||||||||||||.||||||||.||.||
RBAM_008380__ 451 TATTTGCACAATCGTTATTTTGATAAAAAACTGCCGGATTTTCTGGGGAT 500
BSNT_01362___ 501 CTTTCAAGGCTCAACATATATCGTGATGATTTCCTTCTTTATTATGATTC 550
.||||||||.||..|.||.|||||.||.|||||.|||||.||||||||.|
RBAM_008380__ 501 TTTTCAAGGATCTTCCTACATCGTTATCATTTCTTTCTTCATTATGATAC 550
BSNT_01362___ 551 CGATTGC-CTTGGCTGTGTCTTATATTTGGCCGATGGTTCAATCGGGAAT 599
|||||.| ||| ||.|||.|.||..|.||||||||||||||.||.|||||
RBAM_008380__ 551 CGATTTCGCTT-GCGGTGGCATACGTGTGGCCGATGGTTCAGTCCGGAAT 599
BSNT_01362___ 600 CGGCTCGCTTCAAAGCTTCCTGGTTGCTTCTGGGGCGGTGGGCGTTTGGA 649
|||||||||.|||||.||.||.|||.||||.||||||.|.|||||.||||
RBAM_008380__ 600 CGGCTCGCTGCAAAGTTTTCTCGTTTCTTCCGGGGCGATCGGCGTGTGGA 649
BSNT_01362___ 650 TATACACGTTTTTGGAACGGATTTTAATTCCGACCGGCCTTCATCACTTT 699
|.||||||||..||||.|||||||||||||||||||||||.|||||.|||
RBAM_008380__ 650 TTTACACGTTCCTGGAGCGGATTTTAATTCCGACCGGCCTGCATCATTTT 699
BSNT_01362___ 700 ATTTACACGCCGTTTATTTATGGCCCGGCTGTAGCGGAAGGAGGGATCGT 749
||||||.|.|||||||||||.||.||||||||.||.|||||.||.|||||
RBAM_008380__ 700 ATTTACTCTCCGTTTATTTACGGTCCGGCTGTGGCTGAAGGCGGTATCGT 749
BSNT_01362___ 750 CACGTATTGGGCACAGCATCTCGGCGAATATTCGCAAAGCGCCAAACCGC 799
|||.||||||||.|||||||||||.|||||.||.|||||||.||||||||
RBAM_008380__ 750 CACCTATTGGGCCCAGCATCTCGGGGAATACTCTCAAAGCGTCAAACCGC 799
BSNT_01362___ 800 TGAAGGAGCTCTTTCCGCAAGGCGGATTCGCGCTTCACGGCAACTCGAAA 849
||||.||..|.||.|||||.||.||.||||||||||||||||||||||||
RBAM_008380__ 800 TGAAAGAATTGTTCCCGCAGGGGGGCTTCGCGCTTCACGGCAACTCGAAA 849
BSNT_01362___ 850 ATCTTCGGTATTCCGGGTATCGCCCTGGCTTTTTATGTGACAGCCAAAAA 899
||||||||.||||||||.|||||.||.||||||||.|..||.||...|||
RBAM_008380__ 850 ATCTTCGGCATTCCGGGAATCGCGCTCGCTTTTTACGCCACGGCTTCAAA 899
BSNT_01362___ 900 GGAAAAGAAAAAACTCGTCGCAGGGCTGCTGATTCCTGTCACACTGACAG 949
|||||||||||||.|||||||.||.||..||||.||.|||||..||||..
RBAM_008380__ 900 GGAAAAGAAAAAAATCGTCGCCGGCCTATTGATCCCGGTCACCTTGACGT 949
BSNT_01362___ 950 CGATTGTCGCCGGTATTACAGAGCCAATTGAGTTTACGTTCTTATTCATT 999
|.||||||||.||.|||||||||||.|||||.|||||.|||.|.||.||.
RBAM_008380__ 950 CCATTGTCGCGGGAATTACAGAGCCGATTGAATTTACATTCCTTTTTATC 999
BSNT_01362___ 1000 TCACCTTTCTTATTTGCGGTTCACGCCGTGCTTGCCGCCACAATGTCGAC 1049
||.||.||.||||||||||||||.||..||||||||||..|.|||.|.||
RBAM_008380__ 1000 TCGCCGTTTTTATTTGCGGTTCATGCTTTGCTTGCCGCTTCCATGGCAAC 1049
BSNT_01362___ 1050 AGTTATGTATATGGCCGGCGTCGTCGGAAACATGGGGGGCGGACTGATCG 1099
.||.||||||||||||||||||||||||||.|||||.|||||..||||||
RBAM_008380__ 1050 CGTCATGTATATGGCCGGCGTCGTCGGAAATATGGGAGGCGGTTTGATCG 1099
BSNT_01362___ 1100 AAGCGGTAACCTTGAACTGGATTCCGCTCTTTGG----AAGCCACGGTAT 1145
||||.|..||||||||||||||||||| ||| |||||||||..|
RBAM_008380__ 1100 AAGCTGCGACCTTGAACTGGATTCCGC----TGGCGTCAAGCCACGGCTT 1145
BSNT_01362___ 1146 GACATATGTATATCAAATTTTGATCGGACTCTCGTTTACAGCAATTTATT 1195
|||.||||||||.||.||..|.||||||.|.|..|||||.||..||||.|
RBAM_008380__ 1146 GACGTATGTATACCAGATCATTATCGGATTGTGTTTTACCGCTGTTTACT 1195
BSNT_01362___ 1196 TTTTCGTCTTCAGATTTTTAATCCTCAAATTCAATATCGCTACACCAGGA 1245
||||.||||||.|.||..|.||.|||||||||||.|||||.|||||.||.
RBAM_008380__ 1196 TTTTTGTCTTCCGTTTCCTCATTCTCAAATTCAACATCGCCACACCGGGC 1245
BSNT_01362___ 1246 CGGGAAAAGGATGAACAGCAGGAAACAAAGCTATATTCGAAAAAGGAATA 1295
.|.|||||.||.|||..|||||||||||||||.||||||||||||||.||
RBAM_008380__ 1246 AGAGAAAAAGAGGAAGGGCAGGAAACAAAGCTCTATTCGAAAAAGGAGTA 1295
BSNT_01362___ 1296 TAGAGAAAGAAAAAA-----CAAGGATGAAACGGCCTCCGCTGCTGAAA- 1339
.||||||.|.||..| ||| |.|||||.||..|.||.|..||||
RBAM_008380__ 1296 CAGAGAACGGAAGCAGGCTTCAA--AAGAAACAGCGGCGGCAGACGAAAC 1343
BSNT_01362___ 1340 ----CGGCTGATGACA-CCGCTTTTCTGTATATTGAAGCGCTGGGCGGAA 1384
||| ||| ||| |||||| ||||||||||||||||||||||||
RBAM_008380__ 1344 ACAGCGG--GAT-ACAGCCGCTT---TGTATATTGAAGCGCTGGGCGGAA 1387
BSNT_01362___ 1385 AAGACAACATCACTGAAGTCACAAACTGCGCAACCCGCCTCAGAGTCAGT 1434
|.|||||.||.||.||.|||||.||.|||||.|||||.|||.|.||||.|
RBAM_008380__ 1388 AGGACAATATTACGGAGGTCACCAATTGCGCCACCCGTCTCCGCGTCACT 1437
BSNT_01362___ 1435 GTCAAGGATGAAACAAAGGTTGAACCCGACAACGTATTCCGCGCGCTTGG 1484
|||...||||||.|||||||..||...|||..||..|||.|.|.|||.||
RBAM_008380__ 1438 GTCGCTGATGAATCAAAGGTCAAAAGTGACGCCGATTTCAGAGAGCTGGG 1487
BSNT_01362___ 1485 CGCACACGGCGTTGTCAGGAACGGGAAGGCGTTTCAGGTGATTATCGGAT 1534
.||.|||||.||.|||||.||.||.|.||||.|||||||.|||.||||||
RBAM_008380__ 1488 AGCCCACGGGGTCGTCAGAAAAGGCAGGGCGCTTCAGGTCATTGTCGGAT 1537
BSNT_01362___ 1535 TAAGCGTACCGCAGATGCGGGAGCGTGTGGAAAAATTACTGAATG---AA 1581
||.||||.|||||.||||||||||||||.||.|||.||.|||||| ||
RBAM_008380__ 1538 TAGGCGTTCCGCAAATGCGGGAGCGTGTCGAGAAAATATTGAATGGTTAA 1587
BSNT_01362___ 1582 TAG 1584
RBAM_008380__ 1587 --- 1587
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.