Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01413 and RBAM_008560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:07
# Commandline: needle
# -asequence dna-align/BSNT_01413___yfhD.1.9828.seq
# -bsequence dna-align/RBAM_008560___yfhD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01413___yfhD-RBAM_008560___yfhD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01413___yfhD-RBAM_008560___yfhD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01413___yfhD
# 2: RBAM_008560___yfhD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 160/192 (83.3%)
# Similarity: 160/192 (83.3%)
# Gaps: 0/192 ( 0.0%)
# Score: 672.0
#
#
#=======================================
BSNT_01413___ 1 ATGGGCAGAAATCATATCCACAAAAACCGTGATAAAAACAAACAAAAGCT 50
||||||||||||||||..|||||||||||||||||||||||||||||.||
RBAM_008560__ 1 ATGGGCAGAAATCATACTCACAAAAACCGTGATAAAAACAAACAAAAACT 50
BSNT_01413___ 51 TCCACAAGTTCCTGATGCCTTAAAAAGGGAAACTGACGGCGTTTACGAAG 100
|||.||||||||.|||||.||.|||.|.|||||.||||||...||.||.|
RBAM_008560__ 51 TCCTCAAGTTCCGGATGCTTTGAAACGCGAAACAGACGGCACATATGAGG 100
BSNT_01413___ 101 AATATTCAAGCGAGCTTGCTGATGCAGATGACCGCGAAGCGCAAGAGCGT 150
|||||||||||||||||||||||.|.|.||||||.||||||||.|.|||.
RBAM_008560__ 101 AATATTCAAGCGAGCTTGCTGATTCCGCTGACCGTGAAGCGCAGGCGCGG 150
BSNT_01413___ 151 GCGAAAGCAGCCGACAACAGAGCGAAAAAGAAATCTCGTTAA 192
..||||||.||.|||||||||||.||||..|||.|.||.|||
RBAM_008560__ 151 ATGAAAGCCGCTGACAACAGAGCTAAAAGCAAAACCCGCTAA 192
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