Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01415 and RBAM_008570

See Amino acid alignment / Visit BSNT_01415 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence dna-align/BSNT_01415.1.9828.seq
#    -bsequence dna-align/RBAM_008570___yfhE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01415-RBAM_008570___yfhE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01415-RBAM_008570___yfhE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01415
# 2: RBAM_008570___yfhE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 129
# Identity:      91/129 (70.5%)
# Similarity:    91/129 (70.5%)
# Gaps:          18/129 (14.0%)
# Score: 375.0
# 
#
#=======================================

BSNT_01415         1 TTGAAGGAGGTCCTTTTTATGGAAAAAAAGAGGGAGAAGCACCAGCAAGG     50
                                       ||||||||.|||.|.||.||.||.|||||.||
RBAM_008570__      1 ------------------ATGGAAAAGAAGCGCGAAAAACATCAGCAGGG     32

BSNT_01415        51 CGCCAACCTGAAGAAAATGCAGGAAGTTCTTTATTCAGGCGAATTTAAAA    100
                     .|||||.|||||.||||||||||||||.||||||||.||.|||||.||||
RBAM_008570__     33 AGCCAATCTGAAAAAAATGCAGGAAGTCCTTTATTCCGGTGAATTCAAAA     82

BSNT_01415       101 AAGCGGAAAAAGCTGCTAAGCGGAAGTAG    129
                     |||||||||.|||.||.||.|||||.||.
RBAM_008570__     83 AAGCGGAAAGAGCAGCCAAACGGAAATAA    111


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