Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01423 and RBAM_008650

See Amino acid alignment / Visit BSNT_01423 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence dna-align/BSNT_01423___yfhJ.1.9828.seq
#    -bsequence dna-align/RBAM_008650___yfhJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01423___yfhJ-RBAM_008650___yfhJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01423___yfhJ-RBAM_008650___yfhJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01423___yfhJ
# 2: RBAM_008650___yfhJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     198/271 (73.1%)
# Similarity:   198/271 (73.1%)
# Gaps:           2/271 ( 0.7%)
# Score: 686.0
# 
#
#=======================================

BSNT_01423___      1 ATGAATATGTACATTGAGAAACTGACTAATCTGCTTCTGGAAAAGAACGA     50
                     |||||||..||.||.||.||||||||..||.||||.||.||.||.||.||
RBAM_008650__      1 ATGAATACATATATCGACAAACTGACGGATTTGCTGCTTGAGAAAAATGA     50

BSNT_01423___     51 GATGATCAGCTATATACAGGCAAAAACGTGGGTGGAATTGTTATGGAGCG    100
                     .|||.||||||||.|.||.||...|||.|||||.||..|.||||||.|.|
RBAM_008650__     51 CATGCTCAGCTATTTGCAAGCGCGAACTTGGGTTGAGCTTTTATGGGGAG    100

BSNT_01423___    101 ATTTCGAAGCAACCTATGCAAAAGCCGGACACGCCTATCAAGGTGAAAAA    150
                     ||||||||||.||.||||||||||||||.|.|.|.||||||||.||..||
RBAM_008650__    101 ATTTCGAAGCGACTTATGCAAAAGCCGGCCGCCCGTATCAAGGAGAGCAA    150

BSNT_01423___    151 ATGACTGAAAAAATCGTCACACAATGGATTGAAAACTATGGCGGCCAGCT    200
                     |||||.|||....||||||...|||||||.|||...||.|||.||.||||
RBAM_008650__    151 ATGACGGAACGCGTCGTCAAGGAATGGATCGAATCATACGGCAGCAAGCT    200

BSNT_01423___    201 CCACCTTTTTCAAAGC-TCCCGTAACGACGTGAATGATTACTTAAATCAA    249
                     |||..|.||.||.||| |.|.|.|| |||||...|.||||.||..|||||
RBAM_008650__    201 CCATATGTTCCAGAGCGTTCGGGAA-GACGTTTCTCATTATTTGGATCAA    249

BSNT_01423___    250 AGCAGAGGCCTTTTGCATTAA    270
                     |||||.||.||..||||||||
RBAM_008650__    250 AGCAGGGGTCTCCTGCATTAA    270


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