Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01677 and RBAM_010030

See Amino acid alignment / Visit BSNT_01677 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence dna-align/BSNT_01677___yheA.1.9828.seq
#    -bsequence dna-align/RBAM_010030___yheA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01677___yheA-RBAM_010030___yheA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01677___yheA-RBAM_010030___yheA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01677___yheA
# 2: RBAM_010030___yheA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity:     282/356 (79.2%)
# Similarity:   282/356 (79.2%)
# Gaps:           7/356 ( 2.0%)
# Score: 1091.0
# 
#
#=======================================

BSNT_01677___      1 ATGGCTGTTAATTTTTATGATGTAGCGTATGATCTGGAAAATGCATTACG     50
                     |||||.|||.||||||||||||.|||.||||||||.|||||.||.||.||
RBAM_010030__      1 ATGGCAGTTCATTTTTATGATGCAGCATATGATCTTGAAAAAGCTTTGCG     50

BSNT_01677___     51 TGGGAGCGAAGAGTTCACCCGTTTAAAAAACCTTTACGACGAAGTTAACG    100
                     ....||.||.||.|.||.||||.|.|.|...|||||.||..||||.||||
RBAM_010030__     51 AAACAGTGATGAATACAGCCGTCTGAGAGGGCTTTATGATCAAGTAAACG    100

BSNT_01677___    101 CAGATGAATCAGCGAAGCGCATGTTCGAAAACTTCCGTGATGTACAGCT-    149
                     ||||||||||.||.||.||||||||.||.||||||||..|||||||||| 
RBAM_010030__    101 CAGATGAATCCGCAAAACGCATGTTTGATAACTTCCGCAATGTACAGCTG    150

BSNT_01677___    150 TAGACTCCAGCAAAAACAAATGGCAGGAGAAGAGATTACACAAGAAGAAG    199
                     .|| ||.|||||.|||||.|||.||||.|||||.||.||.||.|||||.|
RBAM_010030__    151 CAG-CTGCAGCAGAAACAGATGTCAGGTGAAGAAATCACTCAGGAAGAGG    199

BSNT_01677___    200 T-GACGCAGGCTCAAAAAACAGTTGCGCTTGTACAGCAGCACGAAAAAAT    248
                     | || ||||||.||||||||.||.||.||.|||||||||||.|||...||
RBAM_010030__    200 TAGA-GCAGGCACAAAAAACGGTGGCTCTCGTACAGCAGCATGAATTGAT    248

BSNT_01677___    249 TTCTCAGCTGATGGAAGCGGAGCAGCGCATGAGCATGCTGATTGGTGAAT    298
                     |||||||||||||||||||||.||||||||||||||||||||.||.||.|
RBAM_010030__    249 TTCTCAGCTGATGGAAGCGGAACAGCGCATGAGCATGCTGATCGGCGAGT    298

BSNT_01677___    299 TGAACAAAATCATTATGAAGCCTTTAGAAGAGCTTTACGGCAGTGTTGAA    348
                     |.|||||||||||||||||.|||.|.|||||||||||||||||.....||
RBAM_010030__    299 TAAACAAAATCATTATGAAACCTCTTGAAGAGCTTTACGGCAGCCAGCAA    348

BSNT_01677___    349 GGCTAA    354
                        |||
RBAM_010030__    349 ---TAA    351


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