Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01701 and RBAM_010200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01701.1.9828.seq
# -bsequence dna-align/RBAM_010200.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01701-RBAM_010200.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01701-RBAM_010200.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01701
# 2: RBAM_010200
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 153/219 (69.9%)
# Similarity: 153/219 (69.9%)
# Gaps: 54/219 (24.7%)
# Score: 717.0
#
#
#=======================================
BSNT_01701 0 -------------------------------------------------- 0
RBAM_010200 1 ATGGGAGCAGTTCAGAGAGAGGGGGAATCTCCCATCATTTTATTCTATTT 50
BSNT_01701 1 ----GTGGCTGCCGTGTTTATTTTATATTTCATAAACAGGCTCACCAATA 46
|||||||||.||||||||.|.||||||||||||||||||||.||||
RBAM_010200 51 TATCGTGGCTGCCCTGTTTATTCTTTATTTCATAAACAGGCTCACAAATA 100
BSNT_01701 47 CATTATGCCTTGTCAGAGAGATTCCTGAAGAGCGGCAAGATAAGGTATTC 96
|||||||||||||||||||||||||||||||.|||||.||||||||||||
RBAM_010200 101 CATTATGCCTTGTCAGAGAGATTCCTGAAGACCGGCAGGATAAGGTATTC 150
BSNT_01701 97 CGATTTATTAATGTATCTATATTAATTTTACTGATCTCTTCGTTTGTGGA 146
||.|||||||||||||||||.||||||||||||||||||||.||.||.||
RBAM_010200 151 CGTTTTATTAATGTATCTATTTTAATTTTACTGATCTCTTCATTCGTCGA 200
BSNT_01701 147 GATCTCCTTTACAGTGTAA 165
||||||||||||.||||||
RBAM_010200 201 GATCTCCTTTACTGTGTAA 219
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