Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01704 and RBAM_010230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_01704___hpr.1.9828.seq
# -bsequence dna-align/RBAM_010230___hpr.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01704___hpr-RBAM_010230___hpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01704___hpr-RBAM_010230___hpr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01704___hpr
# 2: RBAM_010230___hpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 621
# Identity: 489/621 (78.7%)
# Similarity: 489/621 (78.7%)
# Gaps: 18/621 ( 2.9%)
# Score: 1904.0
#
#
#=======================================
BSNT_01704___ 1 ATGAATCGAGTGGAACCGCCCTATGATGTGAAAGAAGCTCTAGTCTTCAC 50
.|||||||.||.||||||||.||.|||.|.|||||||||.||.|||..||
RBAM_010230__ 1 TTGAATCGTGTTGAACCGCCTTACGATCTAAAAGAAGCTTTAATCTATAC 50
BSNT_01704___ 51 CCAGAAAATGGCTCAGCTTAGCAAGGCTCTTTGGAAATCGATCGAGAAGG 100
|||.||||||||.|||||...|||.||.||.||||||||.||||||||.|
RBAM_010230__ 51 CCAAAAAATGGCGCAGCTGTCCAAAGCGCTCTGGAAATCTATCGAGAAAG 100
BSNT_01704___ 101 ATTGGCAGCAATGGCTCAAACCGTATGACCTGAATATTAATGAGCATCAT 150
|.||||||.|.|||||.||.|||||.|||||.||||||||||||||||||
RBAM_010230__ 101 ACTGGCAGAATTGGCTGAAGCCGTACGACCTTAATATTAATGAGCATCAT 150
BSNT_01704___ 151 ATTTTATGGATTGCGTATCAATTGAATGGAGCTTCCATTTCTGAAATCGC 200
||.|||||||||||.|||||..|.||.||||||||.|||||.||||||||
RBAM_010230__ 151 ATATTATGGATTGCCTATCAGCTTAAAGGAGCTTCTATTTCAGAAATCGC 200
BSNT_01704___ 201 GAAGTTCGGGGTCATGCACGTATCAACCGCATTCAACTTTTCAAAAAAGC 250
.||.|||||.||.||||||||||||||.|||||.||||||||||||||||
RBAM_010230__ 201 CAAATTCGGCGTTATGCACGTATCAACTGCATTTAACTTTTCAAAAAAGC 250
BSNT_01704___ 251 TGGAAGAACGGGGATATTTAAGGTTCTCCAAACGGCTGAATGATAAACGG 300
|.|||||||||||||||.|.|..||.|||||.||.|||||||||||||||
RBAM_010230__ 251 TTGAAGAACGGGGATATCTGAAATTTTCCAAGCGTCTGAATGATAAACGG 300
BSNT_01704___ 301 AACACATATGTCCAATTGACTGAGGAAGGTACCG----AGGTATTCTG-G 345
|||||.||..|.||.||.||.||.||||| | |.||||| || .
RBAM_010230__ 301 AACACGTACATTCAGTTAACAGAAGAAGG----GGAAAATGTATT-TGAA 345
BSNT_01704___ 346 AGCTTGCTTGAGGAATTTGATCCGACACGCAACGCTGTTTTTAAAGGGTC 395
|||.||||||||||.|||||||||.|..|.||||||||.||||||||.||
RBAM_010230__ 346 AGCCTGCTTGAGGAGTTTGATCCGTCGAGAAACGCTGTGTTTAAAGGCTC 395
BSNT_01704___ 396 ACAGCCTTTGTATCATTTATTCGGAAAATTTCCTGAAGTGGCAGAAATGA 445
||||||..|.||.||.||||||||.||.||||||||.||.|.||||.|.|
RBAM_010230__ 396 ACAGCCGATCTACCACTTATTCGGGAAGTTTCCTGAGGTTGAAGAATTAA 445
BSNT_01704___ 446 TGTGTATGATACGCCATATCTACGGCGATGATTTTATGGAAATTTTCGAA 495
..|||.|.||.|||||.||.||||||||.|||||||||||.||.|||||.
RBAM_010230__ 446 CCTGTGTCATCCGCCACATTTACGGCGAAGATTTTATGGAGATATTCGAG 495
BSNT_01704___ 496 ACGTCACTCACCAATATTGACAATGACTTTGAAAGCGTAAACGGAAAACT 545
|..|||.|.||.||.||..|||||||.|||||.||.|.|.||||||..||
RBAM_010230__ 496 AAATCATTGACAAACATAAACAATGATTTTGATAGTGAAGACGGAAGGCT 545
BSNT_01704___ 546 GAAGAAAAAAGCAAAGGAC-AGTGCGGCGG---ATGAACCGGCTGAAGAG 591
||||||||| ||.|||| |.| ||||.| |||||.|||||||||||
RBAM_010230__ 546 GAAGAAAAA---AACGGACGAAT-CGGCTGTCCATGAAACGGCTGAAGAG 591
BSNT_01704___ 592 CTTGAACCTGTAAACAGTTAA 612
||.|||||..|.|||||||||
RBAM_010230__ 592 CTGGAACCGATCAACAGTTAA 612
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