Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01727 and RBAM_010360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence dna-align/BSNT_01727___hemH.1.9828.seq
# -bsequence dna-align/RBAM_010360___hemH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01727___hemH-RBAM_010360___hemH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01727___hemH-RBAM_010360___hemH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01727___hemH
# 2: RBAM_010360___hemH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 945
# Identity: 747/945 (79.0%)
# Similarity: 747/945 (79.0%)
# Gaps: 21/945 ( 2.2%)
# Score: 2961.5
#
#
#=======================================
BSNT_01727___ 1 GTGAGTAG---AAAGAAAATGGGGCTTCTCGTGATGGCGTACGGCACGCC 47
.||||.|| ||||||||||||.|||||.||.|||||.|||||.|||||
RBAM_010360__ 1 ATGAGCAGCAAAAAGAAAATGGGACTTCTTGTCATGGCTTACGGAACGCC 50
BSNT_01727___ 48 TTATAAGGAAGAAGATATTGAACGTTATTATACACATATCAGAAGAGGCA 97
|||.||.|||||.||.||.||||||||||||||.|||||||||.|.||.|
RBAM_010360__ 51 TTACAAAGAAGAGGACATAGAACGTTATTATACGCATATCAGACGCGGAA 100
BSNT_01727___ 98 GAAAGCCTGAACCTGAAATGCTTCAAGATTTGAAAGACAGATACGAAGCG 147
|||||||.||.|||.|.||||||||||||||.|||||||||||.||||||
RBAM_010360__ 101 GAAAGCCGGAGCCTCATATGCTTCAAGATTTAAAAGACAGATATGAAGCG 150
BSNT_01727___ 148 ATTGGCGGCATTTCACCGCTTGCCAAAATCACAGAAGAGCAGGCGCATAA 197
||.||.||||||||.|||||.||.|||||.||..|.|||||||||.|.||
RBAM_010360__ 151 ATCGGAGGCATTTCGCCGCTGGCGAAAATTACGCAGGAGCAGGCGGAGAA 200
BSNT_01727___ 198 TCTGGAACAGCACTTGAATGAAATTCAGGATGAGATTACGTTTAAAGCGT 247
.||.|.|||||..||.||||||||.||||||||..|.||.||.||||.||
RBAM_010360__ 201 GCTCGCACAGCGTTTAAATGAAATCCAGGATGACGTAACATTCAAAGTGT 250
BSNT_01727___ 248 ATATCGGACTGAAGCATATCGAGCCGTTTATTGAAGACGCCGTAGCAGAG 297
|.||||||.|.||.|||||.||.|||||||||||||||||.||.||.||.
RBAM_010360__ 251 ACATCGGATTAAAACATATTGAACCGTTTATTGAAGACGCGGTGGCGGAC 300
BSNT_01727___ 298 ATGCATAAGGATGGCATTACAGAAGCAGTCAGCATCGTGCTGGCGCCGCA 347
||||||||.||.||||||||||||||.||||||.|.|||||.||.||.||
RBAM_010360__ 301 ATGCATAAAGACGGCATTACAGAAGCTGTCAGCCTTGTGCTCGCCCCTCA 350
BSNT_01727___ 348 TTTCTCCACGTTCAGCGTTCAGTCCTACAACAAACGTGCCAAAGAAGAGG 397
|||.||.||.||||||||.|||||.|||||||||||.||.||||||||.|
RBAM_010360__ 351 TTTTTCAACATTCAGCGTCCAGTCATACAACAAACGCGCGAAAGAAGAAG 400
BSNT_01727___ 398 CTGAAAAACTCGGCGGCTTAACGATTACGTCAGTTGAAAGCTGGTACGAT 447
|.||.||.|||||||||||.||.||.|.|||.||||||||||||||.|||
RBAM_010360__ 401 CGGAGAAGCTCGGCGGCTTGACCATCAAGTCTGTTGAAAGCTGGTATGAT 450
BSNT_01727___ 448 GAACCGAAGTTCGTGAAATATTGGGTTGACCGAGTGAAGGAAACATATGC 497
||||||||.|||||..|.||||||||.|.||..||||||.|||||||||.
RBAM_010360__ 451 GAACCGAAATTCGTTGATTATTGGGTCGGCCAGGTGAAGAAAACATATGA 500
BSNT_01727___ 498 GTCAATGCCTGAGGATGAAAGAGAAAACGCGATGCTCATCGTATCCGCAC 547
.||||||||..|.||.|||.|.||..||||||||||.|||||.||.||.|
RBAM_010360__ 501 ATCAATGCCGAAAGAAGAACGGGATGACGCGATGCTGATCGTCTCAGCGC 550
BSNT_01727___ 548 ACAGCCTGCCGGAAAAAATCAAAGAATTTGGAGACCCGTATCCGGACCAG 597
|||||||.||.||||||||.|||||||..|||||.||||||||.||||||
RBAM_010360__ 551 ACAGCCTTCCTGAAAAAATTAAAGAATACGGAGATCCGTATCCTGACCAG 600
BSNT_01727___ 598 CTGCATGAATCGGCGAAATTGATTGCTGAAGGCGCAGGCGTTTCCGAATA 647
|||.|.|||||.||.|||.|||||||.||||||||.||..||.||||.||
RBAM_010360__ 601 CTGGAGGAATCCGCAAAACTGATTGCCGAAGGCGCCGGAATTACCGATTA 650
BSNT_01727___ 648 TGCTGTCGGCTGGCAAAGTGAAGGGAACACGCCTGATCCTTGGCTCGGAC 697
.||.||||||||||||||.|||||||||||.||||||||.||||||||||
RBAM_010360__ 651 CGCAGTCGGCTGGCAAAGCGAAGGGAACACCCCTGATCCGTGGCTCGGAC 700
BSNT_01727___ 698 CCGATGTTCAGGATTTAACACGTGATTTATTCGAACAAAAAGGC-----T 742
|.|||||.||||||.|.||.||.|||.| |.||.|||| || |
RBAM_010360__ 701 CGGATGTGCAGGATCTCACGCGCGATCT----GTACCAAAA-GCATCCTT 745
BSNT_01727___ 743 ATCAAGCATTTGTATATGTTCCTGTTGGATTTGTCGCGGATCACTTAGAA 792
||.|||||||||||||.||.||.|..||.||.||.||.|||||.|||||.
RBAM_010360__ 746 ATAAAGCATTTGTATACGTGCCCGCAGGCTTCGTTGCCGATCATTTAGAG 795
BSNT_01727___ 793 GTGCTTTATGATAATGATTATGAATGCAAAGTGGTGACTGACGATATCGG 842
||||||||.||||||||||||||||||||||..|||||.||.||..||||
RBAM_010360__ 796 GTGCTTTACGATAATGATTATGAATGCAAAGCTGTGACCGAAGAAGTCGG 845
BSNT_01727___ 843 CGCAAGCTATTACCGGCCGGAAATGCCAAATGCCAAGCCTGAATTTATTG 892
|||||||||.||.||.||||..|||||.||.||..|||||||||||||.|
RBAM_010360__ 846 CGCAAGCTACTATCGTCCGGCTATGCCGAACGCACAGCCTGAATTTATCG 895
BSNT_01727___ 893 ATGCTTTGGCAACAGTCGTATTAAAAAAATTAGGACGTTAA---- 933
|.||..|.|||.|.|||||..|.|||.|..| |||| ||
RBAM_010360__ 896 ACGCGCTTGCAGCGGTCGTGCTGAAAGAGCT-GGAC---AAGTAG 936
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