Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01739 and RBAM_010430

See Amino acid alignment / Visit BSNT_01739 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_01739.1.9828.seq
#    -bsequence dna-align/RBAM_010430___yhfH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01739-RBAM_010430___yhfH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01739-RBAM_010430___yhfH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01739
# 2: RBAM_010430___yhfH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:      99/293 (33.8%)
# Similarity:    99/293 (33.8%)
# Gaps:         154/293 (52.6%)
# Score: 314.0
# 
#
#=======================================

BSNT_01739         1 ATGTCCTCCTATCTTTTCAAAAAAATTGATCCTCCTTCAATATACCCATT     50
                                                                       
RBAM_010430__      0 --------------------------------------------------      0

BSNT_01739        51 TTTCTTGAAAAAAGCATGTTTTAAACATTGTATCAAAACAGTTATTGATT    100
                                                                       
RBAM_010430__      0 --------------------------------------------------      0

BSNT_01739       101 TTTGCAATCTGTTATATTACAATGAAATCACTACAAAGGGGAAAGAGGGA    150
                                                                       
RBAM_010430__      0 --------------------------------------------------      0

BSNT_01739       151 TTGGTTATGCTGGGGAAAATCACAGAATTTTTTAGAAACCTGCCTTCG--    198
                     .|||.||||.|||..||.||..|.||.|||||.|||||..|.||  ||  
RBAM_010430__      1 ATGGGTATGTTGGAAAAGATGTCGGATTTTTTCAGAAATTTACC--CGGT     48

BSNT_01739       199 AAAAAGTGTGCGGAATGCGGAAAAAAGATAGAAGAGCAGCATGAGTGCTA    248
                     ||.||.||.|..|||||||||||..||||.|..||||||.|||||||..|
RBAM_010430__     49 AAGAAATGCGAAGAATGCGGAAATGAGATTGTTGAGCAGTATGAGTGTCA     98

BSNT_01739       249 TGGTAATATCTGCAATGACTGTATAAAAGTAAACGATTTGTAA    291
                     ...||||.|.|||||||||||..|.|||.|.||.|||.|||.|
RBAM_010430__     99 CATTAATCTGTGCAATGACTGCTTGAAAATTAAGGATATGTGA    141


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